| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0332 |
|---|
| Symbol | |
|---|
| ID | 6114561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 425242 |
|---|
| End bp | 426468 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641631819 |
|---|
| Product | argininosuccinate synthase |
|---|
| Protein accession | YP_001758728 |
|---|
| Protein GI | 170724702 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCAG AAATTAAGAA AACCGGTGTG AAAAAAGTTG TTTTGGCTTA TTCAGGTGGA
CTCGATACAT CAGCGATCAT CCCTTGGTTA AAAGAGACTT ATGATGATTG TGAAATTGTC
GCATTTTGTG CCGACGTGGG GCAGGGAGAA GCTGAGTTAG AGGGTTTGCA TGAAAAGGCC
ATCGCTTCAG GTGCTTCTGA GTGTTATATC GTCGATCTAA AAGAGGAGTT GGTTGCAGAT
TATATCTACC CAACTATCGC AACCGGCGCT ATCTATGAAG GGACATATTT ACTCGGCACT
TCTATGGCAA GGCCTATTAT CGCTAAAGCG CAGGTAGAAG TTGCACGTAA AGTTGGCGCC
GATGCTGTCT GTCACGGTTG TACAGGTAAA GGTAATGATC AGGTACGTTT TGAAGGCTGC
TTTGCTGCAC TGGCACCGGA TCTAAAAGTG ATCGCACCTT GGCGTGAATG GGAGATGGTG
AGCCGTGAAG ATCTGCTTGA TTACCTTGCT GAGCGTAATA TCGAAACCAC AGCATCAGCC
ACCAAAATTT ACAGCCGTGA TGCTAATGCT TGGCATATCT CCCATGAAGG TGGCGAGTTA
GAAGATCCAT GGAATGAGCC AACCAAAGGC GTGTGGACCA TGACTGTCGC ACCAGAAGAT
GCACCGGATA AACCTGAATA TGTGACGATC GATATCGAGC AGGGCAAAAT CACTAAGGTG
AACGGTGAGC TCCTTTCCCC TTATGCAGCA CTAATGGTGC TAAATGAGAT AGCGGGTGCA
CATGGTGTAG GTAGAATTGA TATCACAGAG AATAGACTCG TTGGCATGAA GTCTCGTGGC
TGTTATGAAA CACCTGGTGG CACCGTTATG TTTGCTGCGC TCCGTGCCAT TGAGGAGTTG
GTGTTAGATA AGAGCAGTCG TGAATGGCGT GAGCAGGTCG GTGCCCAGAT GGCACACCTT
GTTTATGATG GTCGCTGGTT TACTCCTCTG TGCGAGTCTC TGTTAGGTGC ATCTCAGCCT
TTAGCTAACC TTGTTAATGG TGAGGTTGTT ATCAAGCTCT ATAAGGGGCA GGCTCAAGCG
GTTCAGAAGC GCTCACCTAA TAGCTTGTAT TCAGAAGAGT TTGCGACATT TGGTGAGGAT
GATGTCTATA ACCAAAAAGA TGCAGAGGGC TTTATTCGCC TTTACTCACT AGCCAGTCGT
ATCAGAGCGT TAAATAGTAA GAGCTAG
|
|---|
| Protein sequence | MSAEIKKTGV KKVVLAYSGG LDTSAIIPWL KETYDDCEIV AFCADVGQGE AELEGLHEKA
IASGASECYI VDLKEELVAD YIYPTIATGA IYEGTYLLGT SMARPIIAKA QVEVARKVGA
DAVCHGCTGK GNDQVRFEGC FAALAPDLKV IAPWREWEMV SREDLLDYLA ERNIETTASA
TKIYSRDANA WHISHEGGEL EDPWNEPTKG VWTMTVAPED APDKPEYVTI DIEQGKITKV
NGELLSPYAA LMVLNEIAGA HGVGRIDITE NRLVGMKSRG CYETPGGTVM FAALRAIEEL
VLDKSSREWR EQVGAQMAHL VYDGRWFTPL CESLLGASQP LANLVNGEVV IKLYKGQAQA
VQKRSPNSLY SEEFATFGED DVYNQKDAEG FIRLYSLASR IRALNSKS
|
|---|
| |