| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0331 |
|---|
| Symbol | |
|---|
| ID | 6114560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 424269 |
|---|
| End bp | 425177 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641631818 |
|---|
| Product | ornithine carbamoyltransferase |
|---|
| Protein accession | YP_001758727 |
|---|
| Protein GI | 170724701 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCACT TATTATCGAT TAAAGACCTG TCTCAGGAGC AGCTTAAAGA GTTGTTATCA
CTTGCTAAGA AGATTAAGGC GAATCCTGCT GAGTATCGAC ATGCCTTGGA CGGTAAAAGT
GTGGTTATGC TGTTTGAGAA GCCTTCATTA AGAACACGTG TGAGCTTTGA TATAGGTATT
AATAAGTTAG GTGGTCATTG CCTCTATCTT GATCAACAAA ATGGTGCATT AGGTAAGCGT
GAACCTGTGT CAGACTTCGC TGCTAATATC TCTTGTTGGG CTGATGCCAT TGTGGCGAGA
ACCTTCCTAC ACTCGACGAT AGAGACGTTA GCTGAACATG GCAGTGTTCC TGTTATTAAT
GCGCTATCAG ATCTTTATCA CCCTTGTCAG GGCCTGGCTG ATTTTCTCAC GCTTTCGGAG
CAGTTTGATG ACGTTAGCCA AGTAAAGCTT GCTTATGTTG GCGACGGTAA CAATGTAACC
CACTCCTTGA TGTACGGAGC GGCAATTCTA GGTGCGACGA TGACAGTTGT TTGTCCGCCG
GGACACTTTC CCGATGGTCA AGTGGTGGTT GAGGCTCAGG CATTGGCGGC TAAATATGGC
GGTAAGCTAA TACTCACCTC TGATGTTGAA CAGTTGGCCG AGCAAGATGC CATCTATACC
GACACCTGGA TCTCAATGGG TGATGATACT GACTTAAGCG AGATCAAAGC CAAGTTTCAG
CCCTACCAAG TTAATGAAGC CATGATGAAA CAAGCTGGTG CTAGTTACTT CATGCACTGT
TTACCGGCAT ATCGCGAAGT GGAGGTGACA GCTGAAGTGG TTGATGGTGA AGGCTCACTG
ATACTGCAGC AAGCTGAGAA CAGAATGCAT GCACAAAATG CCGTTTTAGT TACTTTATTA
GGTCAATAA
|
|---|
| Protein sequence | MDHLLSIKDL SQEQLKELLS LAKKIKANPA EYRHALDGKS VVMLFEKPSL RTRVSFDIGI
NKLGGHCLYL DQQNGALGKR EPVSDFAANI SCWADAIVAR TFLHSTIETL AEHGSVPVIN
ALSDLYHPCQ GLADFLTLSE QFDDVSQVKL AYVGDGNNVT HSLMYGAAIL GATMTVVCPP
GHFPDGQVVV EAQALAAKYG GKLILTSDVE QLAEQDAIYT DTWISMGDDT DLSEIKAKFQ
PYQVNEAMMK QAGASYFMHC LPAYREVEVT AEVVDGEGSL ILQQAENRMH AQNAVLVTLL
GQ
|
|---|
| |