| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0323 |
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| Symbol | |
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| ID | 6114549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 405095 |
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| End bp | 407302 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641631807 |
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| Product | patatin |
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| Protein accession | YP_001758719 |
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| Protein GI | 170724693 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000755516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0106628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACGTT CTACAGCACT ATTCCTACTA CTCTCTCTTC TCTCCAGCTC TGTTTTTGCG
GAAGTCAGAC CTAAAATTGG TCTAGTGCTC AGTGGTGGTG GGGCCAAAGG GGCTGCCCAT
ATTGGCGTGC TTAAAGTTCT CGAGGAAAAT CGAGTACCTG TCGATTATAT CGCTGGGACA
AGTATTGGTG CCTATGTCGC TGGTATGTAT GCACTCGGTT ATAGCGCTGC AGAGATTGAA
CAGATCATGA TGAATGAGTC TTGGTCAAAC GGTTACTCCG ATACGATCCC AAGGGAGTCG
TTGAGTTATC GCAATAAGCA GCAGCGAGAT CGTTTTAATA TTCCGTTAAA CATTGGCTAT
AGCGATGAAA CCGTGAAACT CCCCAATGGC CTGCTTCGTG GTCAAACCAT GTCGCAACTA
TTACAACGCT CAACTGGGTT GGTTCATCAA TTTGGGCACT TCGATGAACT CGCTATCCCC
TACCGCGCAG TAGCGACAGA TCTGGAAACC AGTAACCCTG TTATCCTCTC AACAGGCAGT
ATCGTCAAAG CGATGCAAGC ATCCGCAACC GTACCCGGAG CACTTCAACC AATTGAGTAT
GAAGGCAAAC TGTTAGTTGA TGGTGGTATT GCGAATAATA TGCCTGTCGA TGTCGTCAAA
GCGCTAGGCG CCGATATCGT AATCGCTGTA GATATTGGTT CATCTCTGGT GAAAAAAGAG
GCATTAGATA GCACTGTAGC TGTACTTAAT CAGCTATCAA CCATGCTGAC CAATGCAAGT
ACTGAGAAGC AAAAGTTGTT GCTTACTGAA GATGATATTT TGATCCGGCC TGATGTTGGG
GATATGAGCA CAACCGATTT TGAGATTATG CCTCAGGCCT ACGCGCTTGG CGAAAAAGCG
GCACTTGAAC ATCTGTTAAG TCTTAAAGGC TTGGGTGTTG GTGAGGCCGA GTATGTGGTT
TATCAAGATA ACAAGCAGAG ATTAAGCAAG CGTTGGCAAG ATAGTGTGGA ACGTCCTTTA
GTGGAGATTG TGTTTAATAA CAACTCTAAA GTGAGTGAGT CCCTGTTAAG AGAGACACTC
GATCTTCATG AAGGTGAGGT GGTGACGAAA GAGGAGTTAG AGAGAGCCAT TGCTAATGTT
TATTCATTAG ATAAGTTTGA GCGAGTGAAT GCTGAATTTG TCGATACGGA TAGAGGACGG
ATCTTGACCC TAAATACTCG AGCAAAATCT TGGGGGCCTA ACTATTTTGG CCTCGGATTT
AGTTGGGAAG ATGACCTTAC TGAAGACTCA AGTATGTCTT TGGACTTCTC CTATACCATG
ACAGATCTAA CCGATACTGG TGGAGAGTGG CGTAATGAGT TAAGGCTTGG TTTTGAGAAG
TTACTATCAA CCGAGTTTTA TCTGCCAATG GATTATGATC AGGCTTTCTA TGCCAGAGCA
GGGCTGGCTT ATGAGCTCAA GGATTTTAGT ATCTATGAAG ATAACGCTAA ATTTGTGGAG
TTTTCTCAAA CTGTGTACCG AGCAGATGTA GGCGTTGGCT ATAACTATAC ATTGGAAGGT
TTGGTTGAGT TGGGGGTTAC CAATGAGAAA GGTGAATTTG AATTTCTTAA AGATACTTAT
GACTATGACT CTTACGGTAT TTATTTAAAG CTAGGTTTCG ATAACCTCAA TAGTATGAAC
TTCCCAACGT CAGGTAATCG ATTCACTTTT AATATGTATT ATCGAAGAGA CGTAAATGAG
TTATCTGGTG AGGACTCTTA CGCTGAGAAC TCGCTTCAAA TAGAAGCCGA CTGGCGAGGG
GCTTTGAGCT TAGGGAACCA TGCAATAGTA GGTATTGCCT CATTGGCAAC CATTGATACT
GAAGAGCAGT TTAGTCCACA TCTATCTGAA CTGGGTGGCT TCCTTAATCT CTCCGGTTAC
CACAAAAACT CCTTGGTTGG CTCTCATAAA ATATTTGGTG CTTTTGTGTA TCAATATGAT
TTGGGACGTG ATGTGCTGGG AATGACGGAT TACCCACTCT ATCTTGGTGG TAGTTTGGAA
GCTGGTAACG TTTGGCAGAA CAAAGATAAC ATTGACCTCA ACGATCTCAT CTATTCAGGT
AGCCTATTTT TCGGTACTGA TACCAGTATG GGGCCCGCAG CCTTAGGTTT TGGTTGGGCC
GATGATGGTG AGATGACGCT GTTTCTCTTT TTAGGAAAGA GTTGGTAA
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| Protein sequence | MIRSTALFLL LSLLSSSVFA EVRPKIGLVL SGGGAKGAAH IGVLKVLEEN RVPVDYIAGT
SIGAYVAGMY ALGYSAAEIE QIMMNESWSN GYSDTIPRES LSYRNKQQRD RFNIPLNIGY
SDETVKLPNG LLRGQTMSQL LQRSTGLVHQ FGHFDELAIP YRAVATDLET SNPVILSTGS
IVKAMQASAT VPGALQPIEY EGKLLVDGGI ANNMPVDVVK ALGADIVIAV DIGSSLVKKE
ALDSTVAVLN QLSTMLTNAS TEKQKLLLTE DDILIRPDVG DMSTTDFEIM PQAYALGEKA
ALEHLLSLKG LGVGEAEYVV YQDNKQRLSK RWQDSVERPL VEIVFNNNSK VSESLLRETL
DLHEGEVVTK EELERAIANV YSLDKFERVN AEFVDTDRGR ILTLNTRAKS WGPNYFGLGF
SWEDDLTEDS SMSLDFSYTM TDLTDTGGEW RNELRLGFEK LLSTEFYLPM DYDQAFYARA
GLAYELKDFS IYEDNAKFVE FSQTVYRADV GVGYNYTLEG LVELGVTNEK GEFEFLKDTY
DYDSYGIYLK LGFDNLNSMN FPTSGNRFTF NMYYRRDVNE LSGEDSYAEN SLQIEADWRG
ALSLGNHAIV GIASLATIDT EEQFSPHLSE LGGFLNLSGY HKNSLVGSHK IFGAFVYQYD
LGRDVLGMTD YPLYLGGSLE AGNVWQNKDN IDLNDLIYSG SLFFGTDTSM GPAALGFGWA
DDGEMTLFLF LGKSW
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