| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0318 |
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| Symbol | pdhR |
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| ID | 6114544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 393416 |
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| End bp | 394168 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641631802 |
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| Product | transcriptional regulator PdhR |
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| Protein accession | YP_001758714 |
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| Protein GI | 170724688 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.405359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTATA GCAAAATAAA CCAGCCAAAA ATATCCGATG TCATTATGGG GCAGTTGGAG
CAGATGATCC TTGAAGGAAG CCTTCAACCG GGTCAAAAGT TACCACCTGA GCGCGAGCTT
GCACTTCAAT TCGAGGTCTC TCGCCCGTCA CTACGCGAAG CTATCCAGAA GCTAGAAGCC
AAAGGCTTGT TAATGCGCCG TCAAGGCGGT GGTACTTACG TGAAAGAGCA GCTTTGGCAG
AGCTTAGCTG ATCCGATAGT GGAGCTGATG CATAGCGACT CAGAAAGTCA ATATGACTTG
TTGGAGTTTC GTCATGCAAC GGAAGGGATG ATGGCTTATT TTGCAGCCCT TCGTGGTACC
GATGCAGATA TGCAAAATAT CAAGCGCACT ATTATGGACG TTGAAGCTGC GAAAGAGATT
GAACAGCAAG CTAAGGCGAT TGTGTGCTTC TATCGAGCGG TAGCAGAGGC GTCACATAAC
GTCGCTATGC TTCATCTCGT ATTAAGTTTA TCTCCTGTGT TACATAAAAA TGTAGCGCAG
AACTTGGAAC TTCTAGATCG GAGAGAGGAA GCTTCCACTA TGGCTAACGA TCATAGGCGA
GCTCTGCTTG CTGCTATTGT TCGCCGCGAT CCCGATGCAG CAAGAGAAGC CTCGAATGAA
CACCTAAGTT ACATCGAGGA AGTCATGTTG TCTGTGAGGG AAGAAGATAG TCGGTTGCAG
CGAAGCCTGC GCCGTTTAAA AAGCGGTGTT TAA
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| Protein sequence | MAYSKINQPK ISDVIMGQLE QMILEGSLQP GQKLPPEREL ALQFEVSRPS LREAIQKLEA
KGLLMRRQGG GTYVKEQLWQ SLADPIVELM HSDSESQYDL LEFRHATEGM MAYFAALRGT
DADMQNIKRT IMDVEAAKEI EQQAKAIVCF YRAVAEASHN VAMLHLVLSL SPVLHKNVAQ
NLELLDRREE ASTMANDHRR ALLAAIVRRD PDAAREASNE HLSYIEEVML SVREEDSRLQ
RSLRRLKSGV
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