| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0317 |
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| Symbol | |
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| ID | 6114543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 392174 |
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| End bp | 393028 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641631801 |
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| Product | regulatory protein AmpE |
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| Protein accession | YP_001758713 |
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| Protein GI | 170724687 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.810004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCAC TGTTCTCCTT GTTAGTGGCA ATCTTAGTTG AGCGATTGAA GTTTCTGCCT
CAATCTTGGC AACTCGATTC GATTCTTAAT CTCTATTCAA AGACGCTGTT TGGCAATAAG
CAGTTAAGCT CTGATGTTAT GATGGCCTTG GCACTGATTC TGCCTGCTAT CGCCGTTCAA
GTTGCCATGT GGGCGGTTAA TGGGATCTTC TGGGGATTAG TGAGTCTTAC CTTGTGGGTG
GCGATCTCAA TTTTGTGCTT TAGTCACTTA AAGCAGAGAC AGCTGTTTAA GCGTTACATG
CAAGCTGCTT GCAGAGGCGA TTCTCAAGCT TGTTACCATT TTGCCGATGC GCTCGATCCT
AACGTCTCAT TAGATGCTGT TTCTGAGGAG GAGTTAGGGG CTAAAGTTGG GCAAAGTGCG
GCTTGGCTAA ACTACCGCTT TTATGGTGCT GTTGCGCTGT TTCTTATCAT ACTTGGCCCA
GCAGGAGCGG TTTTCTATTG CACGGTTCGT TATTTTTCTG ACCAGAACCA AGAGGAGAAG
CTTGAGCTTC CTTTAGTGGA AGATGTGTTA ATGGTACTTG ATTGGTTACC TAGCCGCATT
TTTGCTTTTG GATATGTCCT CAGTGGTCAG TTTTCCCAAG CCTTCGCTTG TTGGATGCAA
TACGCGTTAA ATATCCGCAG TAGTGCTAGG GAGGTCGTTA CTCAGGTTGC ACAGGCCGCT
GAGCCGCAGC CAGAGACTTC TGCAACACCT ATCTGTACAC AGTCAACTTT AAGCCTACTG
CAACTGAGTA AGCGAAATTT TATTCTTTTA CTTGTTTGCT TGTCCATGTT GACCATCTTT
GGTGTCGTGG CTTAA
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| Protein sequence | MMALFSLLVA ILVERLKFLP QSWQLDSILN LYSKTLFGNK QLSSDVMMAL ALILPAIAVQ
VAMWAVNGIF WGLVSLTLWV AISILCFSHL KQRQLFKRYM QAACRGDSQA CYHFADALDP
NVSLDAVSEE ELGAKVGQSA AWLNYRFYGA VALFLIILGP AGAVFYCTVR YFSDQNQEEK
LELPLVEDVL MVLDWLPSRI FAFGYVLSGQ FSQAFACWMQ YALNIRSSAR EVVTQVAQAA
EPQPETSATP ICTQSTLSLL QLSKRNFILL LVCLSMLTIF GVVA
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