Gene Swoo_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0316 
Symbol 
ID6114542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp391549 
End bp392121 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content43% 
IMG OID641631800 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_001758712 
Protein GI170724686 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGAC AAAATCCGAT TAAATTAAAT GCTGGTTGGG TTCAAAGTGG TGTTAGGGAG 
TGTCTATCCC CCCATTTTAA TGCGCGGCCC AAAGGTGAAG TGAGCCTACT AGTGATTCAC
AATATTAGCT TGCCAGCTGG CTGCTTTGGT ACTCCTTATG TTGATCAGCT TTTTCAGGGT
TGTTTAGACT TAGAAGCTGA TATTAGCTTT GGTGAATTAA AGGGGCTAGA AGTGTCGGCT
CATTTTATGA TCCGTAGAGA TGGTGAAATA GTACAATATG TCTCTTGTGA TGAGCGAGCA
TGGCATGCAG GAGTATCTGA GTTTCAAGGC AGACAAGGCT GTAATGATTT TGCTATCGGT
ATTGAATTAG AGGGGACGGA TCTCATTGCT TACTCTGAGC TTCAATATCA GGCGTTGCTT
AGGTTAACCC TTGCCTTGTT CAATGCATAC CCTATGCTGA ATATGGATAG ACTGGTTGGT
CATAGTGATA TCGCTCCCGG ACGGAAAACA GATCCTGGTG ACAGTTTTGA TTGGTTAAAA
TATAGGGATG GCTTAACTCA AGCATTGGCT TGA
 
Protein sequence
MVGQNPIKLN AGWVQSGVRE CLSPHFNARP KGEVSLLVIH NISLPAGCFG TPYVDQLFQG 
CLDLEADISF GELKGLEVSA HFMIRRDGEI VQYVSCDERA WHAGVSEFQG RQGCNDFAIG
IELEGTDLIA YSELQYQALL RLTLALFNAY PMLNMDRLVG HSDIAPGRKT DPGDSFDWLK
YRDGLTQALA