| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0312 |
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| Symbol | |
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| ID | 6114538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 385999 |
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| End bp | 387261 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641631796 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001758708 |
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| Protein GI | 170724682 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGG CAACAGCAAG CAAAAAAACC AATAAAAAAA CAGCTAAAGC CCAACCTAAG
GTTTTCACCT ATGAGTGGAA AGGCTTAAAC CGTGATGGAA AAAAAACCTC AGGAGAGCTT
CGAGGAGCAA CGATCGCAGA GGTTAAGAGT CAGCTAAAGT CACAAGGAGT CAACCCTAAG
TCAGTAAAGA AGAAAGCTGC ATCTCTGTTT AAACTCGGCG ACCCTAAAGT TACAGCCATG
GACATCGCCA TGGTGACACG CCAAATAGCC ACCATGCTTC AAGCTGGTGT ACCTCTGGTA
ACAACCATAG AGATGCTGGG CCGAGGTCAT GAAAAAGTAA AGATGCGAGA GCTGTTAGGT
ACTATCTTAA CTGAAATACA GTCAGGTATC CCGCTCTCAG ATGCGCTTCG TCCCCACAGA
CAATATTTCG ATGACCTCTA TGTCGATCTT GTCGCAGCTG GTGAGCACTC AGGCTCTCTC
GATGCAGTAT TTGAGCGCAT AGCCCTCTAT AAAGAGAAAG CCGAGGCTCT GAAATCTAAA
ATTAAAAAAG CCATGTTCTA CCCAGCAGCG GTAGTCATCG TTGCGATCGG GGTCACGACT
CTTTTACTCC TGTTTGTAGT GCCACAGTTT CAGGAGATCT TTGCAGGCTT CGGTGCAGAG
CTCCCCGCAT TCACGCAACT CGTCATTCAT ATATCTGAAG CACTGCAAGC ATCATGGTAT
ATCTTTGCTG TTGCTATTAT CATCACTGTT TTTCTCTTTC GCCGCGCTCA CCTGCACTCG
CAGACTTTCA GAGACAAGGT AGATGCACTT ATTTTAAAAA TACCAGCCGT AGGTCCTATC
TTACACAAAG CTGCTATGGC GCGATTTGCA AGAACCTTAG CAACAACCTT TGCTGCAGGT
GTCCCTCTTA TCGATGGGCT TGAATCAGCA GCAGGAGCGT CAGGTAATGC AGTGTATCGT
AATGCGCTGC TCAAAGTGCG CTCTGAAGTG ATGTCGGGAA TGCAGATGAA TGTAGCGATG
CGGACCACGG GACTTTTCCC AGACATGCTA ATTCAGATGG TAATGATAGG TGAAGAGTCA
GGCTCATTGG ATAATATGCT GAATAAAGTG GCTAATATCT ATGAGATGCA GGTAGATGAT
GCTGTAGATG GGTTATCTAG CCTAATCGAG CCTATTATGA TGGTGGTTAT TGGCACTCTA
GTTGGTGGCT TAATCGTCGC CATGTATCTT CCTATCTTCC AGATGGGTAA GATTGTCAGC
TGA
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| Protein sequence | MATATASKKT NKKTAKAQPK VFTYEWKGLN RDGKKTSGEL RGATIAEVKS QLKSQGVNPK
SVKKKAASLF KLGDPKVTAM DIAMVTRQIA TMLQAGVPLV TTIEMLGRGH EKVKMRELLG
TILTEIQSGI PLSDALRPHR QYFDDLYVDL VAAGEHSGSL DAVFERIALY KEKAEALKSK
IKKAMFYPAA VVIVAIGVTT LLLLFVVPQF QEIFAGFGAE LPAFTQLVIH ISEALQASWY
IFAVAIIITV FLFRRAHLHS QTFRDKVDAL ILKIPAVGPI LHKAAMARFA RTLATTFAAG
VPLIDGLESA AGASGNAVYR NALLKVRSEV MSGMQMNVAM RTTGLFPDML IQMVMIGEES
GSLDNMLNKV ANIYEMQVDD AVDGLSSLIE PIMMVVIGTL VGGLIVAMYL PIFQMGKIVS
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