| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0306 |
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| Symbol | |
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| ID | 6114532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 377050 |
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| End bp | 379182 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641631790 |
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| Product | AAA ATPase |
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| Protein accession | YP_001758702 |
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| Protein GI | 170724676 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.933314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGA GTCGTTATCT AATTCGAGTA ACGAGTGTTT CTGGACTCAA CACTCACAAA
GACTTAGTAA CTATCCGTGG CGTACCGATT GAATCTTTCA GAACCCAATC AGCTAAGAAG
GTTGTATTTG CCAAGGTAGC CAAAAATGAC TTGCCAATAC TCCCTGAAGT GGGGCAACAC
TGGAAGCTTA CTGGCACAGC TTCTGAGCAC TATGAAATTG TTAATGGCTT TAAATATTTA
GCTGTAAAAC TAGATGTATC TAACGCCAAA GTAACGCTAC CAGATACGGG TGAACTGTTC
ATTGATTTCG TTAGCTCTTG TGCCGACTTC AAAGGGATTG GAGCGGTTAA AGCTAGAGAA
CTTTGGAACA AGTTCGGCAA AGGTATCTAT GACCTTATGA AAGAGCAGAA CCCCAAATCT
TTTGAGTCCC TATTAAGCCC TGAATCCATC AAAGCACTTC TTGATGGCTG GAGGAAATAC
GACAACTTGA AATACCAATC ATGGTTATCA GGCTTAGGAA TTAGACCTGA GATCTCAGGA
AAAATAGTTA AGTACCACAA AGAAGGCACT ATTAATTCGA TAAAAGAAAA CCCTTATCGC
ATGATGACTT TCGGCATGTC GTTCAAAGAT TCTGATGCAT TAGCGCAAAC AAAATTCAAT
ATGAGTTTGA ACGATGATAG GCGACTTGTT GCTGCTGTAG AGCAAGTACT AAATCAATGG
ATTGGAAAAG GTCATACATT TGCCTATCGA GATGATATCT TCAGTGACGT AATTACCCTT
TTACAAGATA AACAAGCAGC CATACTAGCT CTTAAAAAAG GTTTGGATAA CGGTACTTTC
ATCATAGCTG ATGAAGGTAC ATACCATCCT ACAGGAATGC TGGTAATCGA AAGGATCATT
GCAAAACGAT TCAAAAAACT AGCTAAACTA GAAGCGTGGT CATTTCAACA TGATGATGCA
TATGAGCAAG CTTGTAGCTC ATCTGAGTTT CCTCTGACTG AGCGGCAAGG AGAAGCCGTA
TACAACGCTT TAAACTACTC AATATCCGCT GTTTTTGGGG GGGCTGGTAC GGGTAAAACT
ACGGTAATCA GATCTGTAGT GGCTGGTTTT GAAGCCCTTG GGTTCGAAAT CCATCAAATT
GCACTATCTG GTCGAGCTGC TAAACGTATG CGAGAGTCCA CAGGACGCCC GACAAAGACT
ATAGCCGCAT TTTTAAGAGA TGAGCCAGTT GTTACCGAAA AAGCCGCTGT AATCATTGAT
GAGTCGTCTA TGGTAGACGC AAATACTATG TACCAAATCA TCACCCACAC TCATGACTCA
GTGAAGTTTG TGCTTATCGG TGATCCAGAC CAATTGCCGC CAATTGGTGC TGGTTTAGTA
CTTCATGCAA TTCAAGATTC CAAGCTTGTG CCTAAAGTAA CTTTAGATAT TGTGAAGCGG
CAAGATGCTG AATCTGGCAT TCCTGGTTAT TCATGTGATG TAAAAAATGG CATTGTTCCA
GAGCGCTTGA GCACTGGCGC AGTGACTTTC CATGAGGTGC CTGAAACAGA GATCAATGAA
ACTATCGTTG GCCTCTACGC AGAAGCTACA AATGCGACTC AAATAATTGC AGCAACTTAC
AAGAGAGAAA ATGGCGGTAT CAATGCTCTT AATCACTTAG AACAAACAAC ACTAAACAAT
AGCTCACCAG AATTACAGTT CAGCCTATTT AATGAAGACT TCATACTCAA TTTGAAAGTC
GGTGATCCCA TCCTTTTAAC CAAGAACGAT ATTAAGCTTG ATATTCAAAA TGGGACATTG
GGAGAGCTAA CTTCAGTAGC CACAACAGAA AACGGATTCG GAGAGATCAC GCTTGATGAT
AACCGAATAA TTAATCTTGA TGAGGCACTG CTTGATCATA TTCAGCTAGC CTACGCAATA
TCATTACACA AAGCACAAGG GAGCCAGTTT GAGCGTATTG TTATCCCTAT AGTACCAAGC
AAGCTACTTG ATCGAGGATG GATATACACA GCTATTACAA GAGCCGAAAA GGAAGTTCAT
TTAATCGGAA ATGCAAAGTT GTTTAAACGT TATATCAAGG AGCCTTCAAA AGCCCACTTA
AGACAAATTT ATCTATCTAA ATTACTAAAC TAA
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| Protein sequence | MSKSRYLIRV TSVSGLNTHK DLVTIRGVPI ESFRTQSAKK VVFAKVAKND LPILPEVGQH
WKLTGTASEH YEIVNGFKYL AVKLDVSNAK VTLPDTGELF IDFVSSCADF KGIGAVKARE
LWNKFGKGIY DLMKEQNPKS FESLLSPESI KALLDGWRKY DNLKYQSWLS GLGIRPEISG
KIVKYHKEGT INSIKENPYR MMTFGMSFKD SDALAQTKFN MSLNDDRRLV AAVEQVLNQW
IGKGHTFAYR DDIFSDVITL LQDKQAAILA LKKGLDNGTF IIADEGTYHP TGMLVIERII
AKRFKKLAKL EAWSFQHDDA YEQACSSSEF PLTERQGEAV YNALNYSISA VFGGAGTGKT
TVIRSVVAGF EALGFEIHQI ALSGRAAKRM RESTGRPTKT IAAFLRDEPV VTEKAAVIID
ESSMVDANTM YQIITHTHDS VKFVLIGDPD QLPPIGAGLV LHAIQDSKLV PKVTLDIVKR
QDAESGIPGY SCDVKNGIVP ERLSTGAVTF HEVPETEINE TIVGLYAEAT NATQIIAATY
KRENGGINAL NHLEQTTLNN SSPELQFSLF NEDFILNLKV GDPILLTKND IKLDIQNGTL
GELTSVATTE NGFGEITLDD NRIINLDEAL LDHIQLAYAI SLHKAQGSQF ERIVIPIVPS
KLLDRGWIYT AITRAEKEVH LIGNAKLFKR YIKEPSKAHL RQIYLSKLLN
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