Gene Swoo_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0305 
Symbol 
ID6114531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp375208 
End bp376740 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content38% 
IMG OID641631789 
ProductDNA methylase N-4/N-6 domain-containing protein 
Protein accessionYP_001758701 
Protein GI170724675 
COG category[L] Replication, recombination and repair 
COG ID[COG2189] Adenine specific DNA methylase Mod 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATTC TAAACTGGTT AAATAAAGAG CAATCTGTCA CCGCAGCAAG AGACTGTCCA 
TATCGTTTAT TGGAGCAAGT TCCAGAGTTA TCTTATGGTG AAGCGAATAC CGACAACATG
CTAATCCAAG GTGACAACCT TGAAGCATTG AAAGCGCTCA TCCCTACCCA TGCAGGTAGA
GTTAAATGCA TCTTCATTGA CCCACCATAT AATACCAAAA GTGCCTTTGA GCATTACGAT
GACAATTTAG AGCATAGTCA TTGGTTAAGT ATGATTTACC CAAGGATGGA GCTTTTACAC
CAGCTATTAG CAGATGATGG TTCTATTTGG ATTACATTAG ATGACAATGA ATCGCACTAT
ATGAAGGTGA TTTTAGATGA AATTTTCGGT AGGAAAAACT TTGTTGCTAA CTGCATTTGG
CAAAAGCTTT ATACCGTAAA AAATTCAGCT AAATATTTGT CAGATATGCA TGAGCATGTT
TTGGTTTATT CAAAAAACAA ACAAATATGG GAACGAAATT TACTTCCCAG AACCGAGAAA
TCAGCTTCAA ACTACTCAAA TGCTGATGAT GACAAACGTG GAGCGTGGAC TACCAATGCT
ATTCAAGCAA GAAATTATTA TAGCCTAGGC ACCTATGAAA TAGTTTCGCC ATCAGGAAGA
AAACATGTCC CACCTCAAGG GACATTCTGG CGCATATCTG AAGACAGTTT TAAAAAATTA
GATTCAGATA ATAGAATTTG GTGGGGAAAA GATGGAAACA ATGTTCCAAG GGTTAAGAAG
TTTCTTAGCG AGGCAAAAGA TGGGGTTGTT CCAGCAACAT TTTGGTCTTA CCAAGATGCA
GGTTCTAACG CAGATGCCAA AAAAGAAGTT CGTGAAGTAT TTAATGAGTT AGATGAAATA
TTTATTACTC CAAAACCAGA AAAACTAATC CAAAGAATTT TAAATATAGC CTCAAAAGAA
GGTGATTTAG TATTGGATTC ATTTTTAGGT TCTGGAACTA CTTCTGCCGT TTCTGCAAAA
ATGAATAGAA AATTCATTGG TATTGAATTA GGAGAACATG CAGAAAGCTT ATGCGTTCAT
CGACAAAAAA AGGTAATTGA TGGCGAACAA GGCGGCATAT CTAAGGACGT GGCATGGCAA
GGTGGCGGTG GGTTTAATTT TTATCGCTTA GGTGAGGTTA TCTTTAATGA AAACGGTTCA
TTAAAAGAAG GAATTAGCTT TAATGCCCTT GCTTCTCACA TCTGGTACGG CGATACCCGC
AATTCATTAG ATCAAAAAGA AAAATCACCG TTACTTGGTG TTCACAACGG TACTGCTTAT
TACCTTTTAT ATAACGGTAT CCTTGGGGAT AAACGTCCTG ATGGTGGCAA CGTTTTAACA
TCGAAGGTAT TAGCGATATT GCCTGAGCAC CCGCTAGATG CTGAAAACGG AAAGAAAGTG
ATCTATGGCG AAACCAGCCG TATGGGTTCT GCTCGTCTAA AAAGTGAAAA TATAATATTT
AAACAAATTC CGTATGATGT ACGTGGGAGA TAG
 
Protein sequence
MPILNWLNKE QSVTAARDCP YRLLEQVPEL SYGEANTDNM LIQGDNLEAL KALIPTHAGR 
VKCIFIDPPY NTKSAFEHYD DNLEHSHWLS MIYPRMELLH QLLADDGSIW ITLDDNESHY
MKVILDEIFG RKNFVANCIW QKLYTVKNSA KYLSDMHEHV LVYSKNKQIW ERNLLPRTEK
SASNYSNADD DKRGAWTTNA IQARNYYSLG TYEIVSPSGR KHVPPQGTFW RISEDSFKKL
DSDNRIWWGK DGNNVPRVKK FLSEAKDGVV PATFWSYQDA GSNADAKKEV REVFNELDEI
FITPKPEKLI QRILNIASKE GDLVLDSFLG SGTTSAVSAK MNRKFIGIEL GEHAESLCVH
RQKKVIDGEQ GGISKDVAWQ GGGGFNFYRL GEVIFNENGS LKEGISFNAL ASHIWYGDTR
NSLDQKEKSP LLGVHNGTAY YLLYNGILGD KRPDGGNVLT SKVLAILPEH PLDAENGKKV
IYGETSRMGS ARLKSENIIF KQIPYDVRGR