| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0260 |
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| Symbol | |
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| ID | 6114483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 317036 |
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| End bp | 318367 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641631741 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_001758656 |
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| Protein GI | 170724630 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0286002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGTC GATTAACCGG GCTGGTGATG GCGGCGGGAG TATTGTTTAC TTCAGCGGCT
GTACAGGCAA CTGAAGCGAA AGATATATCT AGCTTTACGC TGGATAACGG CATGAAAATA
ATGGTGTTGG AGGATGCGTC AATTCCCAAT GCAAACATGT ACCTATTTTG GAAAGTGGGT
TCACGTAATG AGGTACCCGG GATCACAGGG ATCTCCCATT TTTTTGAGCA TATGATGTTT
AATGGTTCAG AAAAATATGG ACCTAAGATG TTTGACAGAA CTATGGAGGC TGCTGGTGGA
GCCAATAATG CTTACACCAC AGAGAACTTA ACGGTTTATA CCGATTGGTT TCCTTCAAAC
GCTATCGAAA CGATTTTCGA TCTCGAAGCC GATCGTATCG GCAAGTTAGA TATCGATGCC
AAGATGGTGG AGAGTGAGCG TGGCGTGGTG GCATCTGAGC GTCTTACTGG TTTGGAAAAC
TCTAACTGGC GTACCTTGCA AGAGGAGCTA AAGGGAGCCG CTTTTAGGGC GCATCCCTAT
AGCTGGTCTG TGATTGGCCA TGAATCTGAT ATTGCAGCTT GGAGCTTAGA TGATCTGGTT
CAATATCATA AAACTTACTA CGCACCGAAT AATGCGGTTG TGGTTATTGC TGGTGATGTG
AAGTTGGCGG AAGTGAAAGC TTTAGCTGAC AAATACTTTG CGCCTATTCC TGCACAGGCA
CCACCTAAAG AGGTGAAGAC TGTCGAGCCA CTGCAGAAGG GGGAGCGTAG GGTGTTTGTA
CAAAAAGCCT CTGTCAGTAC ACCAAATGTG ATGTTGGGCT ACCATGTTCC TGCCACCTCT
CATCAAGATT ACTATGCGTT AAACCTGCTC TCCAATATTT TATCGACAGG CAATAGCTCA
CGACTTTACC AATCTTTGGT TGAGAAGCAG CTGGCATTAG AGGTGATGGC TTACCTGCCA
ATGACAATCG ACCCAAACCT GTTTTATGTT ATGGCTGTGG CAAATCCAGG GGTGACGGCT
AAAGAGTTAG AGCTGAATCT TATTGCTGAG ATCAATAGAG TTGCCCGTGA TGGCGTGACT
GAACAGGAGC TTGAAAAGGT AAAGAATATT AAGTTGATGG AGTTCTATCG TTCGATGGAG
ACGATTAACG GTAAGGCGAA TACGATCGGT ACTTATGAGC TCTATTTTGG GAGTTTTGAT
AAGCTGTTTA ATGCACCAGA GGCTTATAAC AAAGTCACTA CCGCAGATAT TCAGCGAGTT
GCACAAATTT ATCTACGCCG TGCAAATCGC ACCGTTGCTG TTTTAGCCGC TACAGAGGAA
GCTGATGAAT GA
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| Protein sequence | MIGRLTGLVM AAGVLFTSAA VQATEAKDIS SFTLDNGMKI MVLEDASIPN ANMYLFWKVG
SRNEVPGITG ISHFFEHMMF NGSEKYGPKM FDRTMEAAGG ANNAYTTENL TVYTDWFPSN
AIETIFDLEA DRIGKLDIDA KMVESERGVV ASERLTGLEN SNWRTLQEEL KGAAFRAHPY
SWSVIGHESD IAAWSLDDLV QYHKTYYAPN NAVVVIAGDV KLAEVKALAD KYFAPIPAQA
PPKEVKTVEP LQKGERRVFV QKASVSTPNV MLGYHVPATS HQDYYALNLL SNILSTGNSS
RLYQSLVEKQ LALEVMAYLP MTIDPNLFYV MAVANPGVTA KELELNLIAE INRVARDGVT
EQELEKVKNI KLMEFYRSME TINGKANTIG TYELYFGSFD KLFNAPEAYN KVTTADIQRV
AQIYLRRANR TVAVLAATEE ADE
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