Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0259 |
Symbol | |
ID | 6114482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 315681 |
End bp | 316988 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641631740 |
Product | amidohydrolase |
Protein accession | YP_001758655 |
Protein GI | 170724629 |
COG category | [R] General function prediction only |
COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0605709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAT CTGACTTGAT TGCAGCATCT AAGCAATTAC TGCTAGCTGG AGCGGCACTC TCCTGTGCTT TTGGGGTGCA AGCTGATAGC GAAATCGATG TAAAACAACT TTCCCAAGAT ATCGAACATC AGGTGATCGA ATGGCGAAGG GATCTTCATC AGCACCCTGA ACTTTCTAAC CGAGAGTTTC GTACCAGTAA AGTGATTAAG CAACACTTGG AATCATTAGG TTTAGAGGTG ACAAGCAATA TTGCTCATAC TGGTGTGGTT GGCATATTGA AAGGGGGCAA ACCCGGCCCC TTAATTGCGC TGCGTGCCGA TATGGACGGA TTGCCCGTCA AAGAGGAGGT GGATCTGCCC TTTGCCTCTA AGGCTACCGA TACCTATAGG GGCCAAGAGG TCGGTGTTAT GCACGCCTGT GGTCACGATA CCCACGTTGC AATTTTAATG GGAGTGGCAC AAAACCTAGT GAAGATAAAA GAGCAGTTAA GCGGTGACGT GATGTTTATC TTCCAGCCTG CAGAGGAGGG CGCGCCAGCA GGTGAGGAGG GCGGTGCTGA GTTGATGCTT AAAGAGGGGC TGTTTGCCAA CAGAAAACCT GAAAAGATAT TCGGTCTCCA TGTTACCTCT AGCATGCCAA CAGGGATGAT AGGCCTGCGT GCTGGACCTG CCATGGCAAG TGAAGACTCC TTTACTATCA CAGTTAACGG TAAACAGACC CATGGCTCTC GTCCCTGGAA TGGCGTCGAT CCTATTGTGA CCTCGGCACA AATCATCAAT AGTGTGCAGA CCATTGTCAG CCGTCAGGTT GATGTCACAG CTGCGCCTGC TGTTGTCAGT TTTGGTGCAA TCAATGGTGG TATACGCTCG AACATTATTC CCGATGAGGT GGAGCTAATA GGCACCATAC GCACGTTCGA TCAGGATATG CGCGCGGATA TTAAGTTAAG ACTCGCTAAC TCTGCAACCA TGATAGCGCA AAGCATGGGC GCTTCGGCAA CAACAAAAAT TGACCAAGGC TATCCTGTGA CGGTCAATAA CCCCGAGTTG GTGGCACAGA TGAAGCCTGT CTTGGCGGGT GTGGTAGGTG ATGAGATGTT GATTGAGCCC GGTTTGATCA CTGGAGCGGA GGATTTCTCC TACTATGCAC TTGAAACCCC TGGTCTGTTT TTCTTTTTAG GGGTCACACC TAAGGGGACT GATCATACGA CGGCGCCAAG TAATCACTCA CCTCGATTCT ATGTTGATGA GAGTGCGTTA GTGGTGGGGG TTGAAGCTTT GACACAGCTC GCGGTGACGT CCTTATAG
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Protein sequence | MNRSDLIAAS KQLLLAGAAL SCAFGVQADS EIDVKQLSQD IEHQVIEWRR DLHQHPELSN REFRTSKVIK QHLESLGLEV TSNIAHTGVV GILKGGKPGP LIALRADMDG LPVKEEVDLP FASKATDTYR GQEVGVMHAC GHDTHVAILM GVAQNLVKIK EQLSGDVMFI FQPAEEGAPA GEEGGAELML KEGLFANRKP EKIFGLHVTS SMPTGMIGLR AGPAMASEDS FTITVNGKQT HGSRPWNGVD PIVTSAQIIN SVQTIVSRQV DVTAAPAVVS FGAINGGIRS NIIPDEVELI GTIRTFDQDM RADIKLRLAN SATMIAQSMG ASATTKIDQG YPVTVNNPEL VAQMKPVLAG VVGDEMLIEP GLITGAEDFS YYALETPGLF FFLGVTPKGT DHTTAPSNHS PRFYVDESAL VVGVEALTQL AVTSL
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