Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0248 |
Symbol | |
ID | 6114471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 302187 |
End bp | 302900 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641631729 |
Product | hypothetical protein |
Protein accession | YP_001758644 |
Protein GI | 170724618 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000693847 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTGT CCGCGATATT TACCGAAGCT TATAACTTCT TTCGCAATCA TATTAGCCAG TTAGCAGCGC TTACCGTACC TATTTTATTT GTTCAAGTTG GCATTCAGTT ATGGCTGGGA ATGGAGATGG CTAATGCAGA TATGGAAAAC CCGCAATTTG GCGGCATTCA TATGGCCGCT GTGATGGCAC TTTTATTGGT TTTTTCACTA CTCATCGCCT CATTAACTAT CTTTTTGGAG ATTCGCTCAC AAGGTCATGA GGCGAATACG GCACTGATCC TTAAAACCAG TTTGAGTTTT GTACCTGGTT TGCTGCTTGC TGGTGTATTT TCTGGTTTAG CTATCCTTGC GCCTGTGATG TTATTCGCAG CCTTTGGTCC TCTCTGGTTA GTGGGATTGA CCATGAGTAT CTACATCTTT GCCCGTCTTG CCTATGTGAA CTTTATGGTG GTGGTTGAGC GTTTAACTCC GTTAGAGGCG ATTAAGGGAA GTTTTAAATT CAGCGGACCT ATCGCATTTA AAACCTTGAT GGTGTTGATG CTTTATATCC CAATCTCTTT GATTGGCGGT TCGCTATCAT CGCTGGCTCA ATCTGTTGGT TTTCCTCTAC AGCTGGTTGT TGAAGTGTTT GTGGCGTTTA TCGGCCTGTT CGTTAACGTT GCTCTGTTTC GCCTGTATAT GGTTTCACGC CCTAACGTGG AAGAGCAGGT TTAG
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Protein sequence | MPLSAIFTEA YNFFRNHISQ LAALTVPILF VQVGIQLWLG MEMANADMEN PQFGGIHMAA VMALLLVFSL LIASLTIFLE IRSQGHEANT ALILKTSLSF VPGLLLAGVF SGLAILAPVM LFAAFGPLWL VGLTMSIYIF ARLAYVNFMV VVERLTPLEA IKGSFKFSGP IAFKTLMVLM LYIPISLIGG SLSSLAQSVG FPLQLVVEVF VAFIGLFVNV ALFRLYMVSR PNVEEQV
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