| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0244 |
|---|
| Symbol | |
|---|
| ID | 6114467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 298574 |
|---|
| End bp | 299839 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641631725 |
|---|
| Product | inner membrane protein YjeH |
|---|
| Protein accession | YP_001758640 |
|---|
| Protein GI | 170724614 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGA TAAAAGGCAA GATAGGACGC TGGCAAGGTG CAGGGTTAAT GGCCACCACC
TTGTTGGGGA CTGGGGTATT TATTCTACCT CAAATGACCA TAGAAACCGC GGGAAGTGGA
GCCTTGATTG CTTGGTTAGT GCTGACTTTA GCCATTATCC CTGTGACCTT AGTGTTTGGC
CGCCTGGCCA GTGTATTCCC CCATGCAGCA GGGCCTGCCT ATTTTGTTGA ACAGGCATTT
GGTCGCACTT CGGGGCGCAC AATAGGTTTA CTGTTTCTAC TCGTTATTCC CCTTGGCGCA
CCTGCTGCAA TTATGATGAC GTTTAAGTTT GTCGATGTGT TGGTGACGCT TTCCGGCTGG
GCAGAGGTGA TGACAGAACT ATTGCTGCTT GGTGTATTAG CGGTTTTAAA TTTCAGGGGA
GTTCAGGTAT CAGCGAAGTT GCAGTTTGCA CTGACCTTAG GAGTCGTCTC TGTTGTCGTT
GCGCTATTTG GTGCTGGTGG CCTAAATCTG AGTGAGATGG AATCATTAAC GAGTGCGGTT
AAGCCTGAGG TTGCTCTTAT CATGGCGGCA GCAGGTATCG CATTTTGGAG TTTTCTCGGT
GTCGAGGCGA TGACACATCT AGCCAATGAT TTTCGTGATC CCAAGAGAGA TATGATCCCA
GCTATGATGA TAGGTACCTT GCTTGTGGGT CTGGTTTACC TTGCCTGTAC ATTACTTTTG
CTGCTGTTTC CTGGAACATC CAACCTAGCT ATGGTTGCGG TATTTGACTC CCTATTAGGT
GGCTATGGCG CACAGGTGAT AGGTATCTTA GGGATCGCCA GTGGTTTAGC GACCGTAAAC
GTATATACAG CGAGTGCGGC TCGATTAGTG TGGAGTTTTA GCCGTGAAGG TGTATTGCCG
AAATATTTTG AACTACTAAA TCACTACGGT GCACCAGTGA GGGCGTCGAG TGTGCTCTTG
GCGGTAATGG CTGTGGTGAT TGTGTTGACC TATATCACTG GGCAGGATTT GGAGGGGCTC
ATTGCTTGGA CCAATGGCGT GTTTGTGATC ATCTATCTGG TTTCTATGTT GGCAGCTATC
AAGTTATTGA GTCGACGCTT TCTTCCTTTA GTGTCACTGA GCTGTCTACT GTGTCTTTTA
TTGGCTTTTG CCCTCGGCAT GAATATGGCC TATGCACTCA TATTGACTGC AATTTTATAT
CCTCTGCTAT GGTGGCAAAA AGTTCATCTG CTTCGTCGAG AAAGGGCTCA AGTTATTTTA
AATTAA
|
|---|
| Protein sequence | MNQIKGKIGR WQGAGLMATT LLGTGVFILP QMTIETAGSG ALIAWLVLTL AIIPVTLVFG
RLASVFPHAA GPAYFVEQAF GRTSGRTIGL LFLLVIPLGA PAAIMMTFKF VDVLVTLSGW
AEVMTELLLL GVLAVLNFRG VQVSAKLQFA LTLGVVSVVV ALFGAGGLNL SEMESLTSAV
KPEVALIMAA AGIAFWSFLG VEAMTHLAND FRDPKRDMIP AMMIGTLLVG LVYLACTLLL
LLFPGTSNLA MVAVFDSLLG GYGAQVIGIL GIASGLATVN VYTASAARLV WSFSREGVLP
KYFELLNHYG APVRASSVLL AVMAVVIVLT YITGQDLEGL IAWTNGVFVI IYLVSMLAAI
KLLSRRFLPL VSLSCLLCLL LAFALGMNMA YALILTAILY PLLWWQKVHL LRRERAQVIL
N
|
|---|
| |