Gene Swoo_0241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0241 
Symbol 
ID6114464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp296221 
End bp296904 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content45% 
IMG OID641631722 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001758637 
Protein GI170724611 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACT CTAGAAGACT ATTTTTAAAA GGCGCGTGTG TTGCTGCTGT TGGTGCCTCT 
GGTTTTACTT TGGTTAGAGC TAAAGAGGCG GGAAAAAATA CATCGAAACC TGTATACAAG
TATGCGTTAG TGCACGATGA AACTAAATGT ATTGGCTGTG ATGCTTGTTC AATCGCATGT
CGAGAGGTAA ATCAGGTACC TGAAGGTGTC AGTCGATTAG AGATAAAGCG AGAGGGGCCT
TTTGGCGAAT ACCCTAATCA ATATTTCCGT TTTACCCGTC ACTCATGTCA ACAATGTGAA
TCGACTCCTT GTGTGGATGT TTGTCCGACG GGAGCTGCCT ATAAAGATCC CGACACTGGC
ATTGTGAGTG TCGATGAATG GAAGTGTGTT GGCTGCCAAT ATTGTATTGC TGCATGCCCA
TACCAGATCC GCTTTATTAA CCCGATCACC AAGGCAGCCG ATAAATGTGA TTTCTGTAAA
GATACCCGTC TTAAGGAAGG CAAGAAACCT GCATGTGTCA GTGCTTGTCC GACTAAAGCA
CTTACCTTTG GTGATATTAC CGATCCTGAC TCGCAGATAG TGAAAGTGCT AAAGTCTGCA
CCTAGCTACC GCAGTAAACT GGATTTAGGT ACTAGGCCTA AGGTGTTTCG CATTGCGTCA
CAAGGTGGTG AGGTTAAGTT ATGA
 
Protein sequence
MSNSRRLFLK GACVAAVGAS GFTLVRAKEA GKNTSKPVYK YALVHDETKC IGCDACSIAC 
REVNQVPEGV SRLEIKREGP FGEYPNQYFR FTRHSCQQCE STPCVDVCPT GAAYKDPDTG
IVSVDEWKCV GCQYCIAACP YQIRFINPIT KAADKCDFCK DTRLKEGKKP ACVSACPTKA
LTFGDITDPD SQIVKVLKSA PSYRSKLDLG TRPKVFRIAS QGGEVKL