Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0227 |
Symbol | |
ID | 6114450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 278594 |
End bp | 279895 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641631708 |
Product | phenylacetate-CoA ligase |
Protein accession | YP_001758623 |
Protein GI | 170724597 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1541] Coenzyme F390 synthetase |
TIGRFAM ID | [TIGR02155] phenylacetate-CoA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACG AATCGACCAA TAACAGAGTT GGAGTGGGAT TGCATTCAAT AGAAAGTGCA AGTATTGATG AGCTTAGAGC TTTGCAATTT GAAAGATTAA AAAAAACGCT TAACCATGCT TATACCAATT CTCCTGCGTA TAAACGAAAG TTTGACGAAG CGGGAGTTCA TCCTGATGAC TTTAATCATC TCGATGATTT GCGAAAGTTT CCATTTACGA CCAAACAAGA TTTAAGAGAT AACTATCCTT TTGGTTTTTT CGCCATGCCA ATGGATGACA TTGTTCGAAT TCATGCATCA AGTGGTACAA CAGGTCAGCC AACAGTCGTT GGCTACACTC AAGAAGATAT ACACACTTGG GCCGACATTG TAGCCCGTTC AGTCTATGCC GCTGGTGGTC GTAAGAAAGA TAAAGTACAT ATCTCCTATG GTTATGGCTT GTTTACCGGT GGTCTAGGTG CTCACTACGG TGCTGAACGA CTTGGCTGTA CGGTGATCCC GATGTCTGGT GGGCAAACAG CAAAACAAGT TCAACTGATC CGTGATTTCA ACCCTGACAT CATCATGGTC ACTCCCTCTT ACATGCTAAA CATTGCAGAT GAAATTGAAC GTCAAGGTAT CGATCCTAAG TCACTGGCAC TGAGATGCGG TATTTTTGGT GCAGAGCCAT GGACCGATGC AATGCGAAGT AACATAGAGC AAAGACTAGG TATTGATGCT GTGGATATTT ACGGTTTGTC GGAAGTGATG GGACCCGGCG TCGCGCAAGA ATGCATTGAA AGCAAAGATG GCCCAACGAT ATGGGAAGAT CACTTTTATC CTGAAATTAT TAATCCTGAA ACCGGTGAAA TTGTTGAAGA TGGTGAGCCT GGCGAATTAG TCTTTACCAG TTTAACAAAA CAAGCCATGC CAATTATCCG TTATAGAACT CGTGATCTCA CTTCACTTCT TGCCTCTACT TCAAGATCAA TGAGACGGAT GGATAAAATT ACCGGAAGAA GTGATGACAT GTTGATCATT AGAGGGGTGA ATGTATTTCC ATCTCAAATC GAAGAGCAAT TATTATCTAT TGAGGGGTTG AGCCCACATT ACTTGGTTGA AGTGGCAAAG ATGGGGCATA TGGACTATCT CACGGTGAAA GTTGAGCGTT CGCTGGATCA GCAGTGTAAC AAGGAGCAAG CCAAGTTACT TGAAAGTAAG ATTAAGAGCG TGATCGGAAT TTCCAGCAAA GTGGTGCTCC TTGAGCCTCA AACCATTGCG CGCTCTGAAG GTAAAGCTTG CAGAGTTACT GATTTACGAT AA
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Protein sequence | MTNESTNNRV GVGLHSIESA SIDELRALQF ERLKKTLNHA YTNSPAYKRK FDEAGVHPDD FNHLDDLRKF PFTTKQDLRD NYPFGFFAMP MDDIVRIHAS SGTTGQPTVV GYTQEDIHTW ADIVARSVYA AGGRKKDKVH ISYGYGLFTG GLGAHYGAER LGCTVIPMSG GQTAKQVQLI RDFNPDIIMV TPSYMLNIAD EIERQGIDPK SLALRCGIFG AEPWTDAMRS NIEQRLGIDA VDIYGLSEVM GPGVAQECIE SKDGPTIWED HFYPEIINPE TGEIVEDGEP GELVFTSLTK QAMPIIRYRT RDLTSLLAST SRSMRRMDKI TGRSDDMLII RGVNVFPSQI EEQLLSIEGL SPHYLVEVAK MGHMDYLTVK VERSLDQQCN KEQAKLLESK IKSVIGISSK VVLLEPQTIA RSEGKACRVT DLR
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