| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0222 |
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| Symbol | |
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| ID | 6114445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 273155 |
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| End bp | 274357 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641631703 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_001758618 |
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| Protein GI | 170724592 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0698438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATG TATTTATTTA TGATGCAGTT AGAACCCCAA TAGGTCGATA CGGTGGCGCT
TTATCCGGTG TACGAGCAGA TGATCTGGGC GCCTTGCCGA TCAAAGCCTT AATGGGTCGT
AATCCCAAGG TCGATTGGCA AAATATCGAA GAGCTATTTT ACGGCTGCGC TAACCAAGCA
GGTGAAGACA ACCGAAATGT CGCCAGAATG TCAGGACTAC TAGCTGGCTT ACCAATAACA
GTTCCTGGGG TGACCTTAAA CCGCTTGTGT GGTTCAGGAA TGGATGCTGT CGGCACTGCA
GCTAGGGCCA TTAAATCCGG TGAAATGAGC CTTGCGATTG CCGGAGGAGT CGAGTCAATG
TCCCGTGCGC CTTTAGTCAT AAATAAAGCA GAAAAGGGCT TTGATCGCAA GATGGAACTA
TTTGATACCA CCATGGGCTG GCGTTTTATT AATGTCGCTT TGAAAGCAGA ATACGGTGTC
GACTCTATGC CTGAAACCGC TGAAAACGTG GCCGAAGCAT TTTCTGTTAG CCGTGCAGAC
CAAGATAAAT TCGCCTATCG AAGCCAGCAA AAAACTGCAG CAGCAGTTGA TGAAGGACGA
TTTGAAAACG AGATAGTGTC CGTGAGTGTA AAGCGGGGTA AACAACACCT TGAATTTGAT
ACTGATGAGC ATTTTCGTCG AGAGACCAGC ATTGATGGCT TATCTGAGCT ATCCGCTCCC
TTTCGAGAAG GAGGCAGTGT GACTGCGGGT AACGCATCAG GGATCAATGA TGGTGCATGC
GCCCTGTTGC TCGGTGATGC CGAGGCGCAG GCGTTATACG GTTTAACTCC TCTTGCCAAA
GTCACTGCCA TGGCAACCTC CGGCGTTGAA CCACGATTGA TGGGTATTGG CCCTGTGTCA
GCGAGCAGAA AAGCACTGGC ACTTGCCGGA CTCAAGATTG AACAGATGGA TGTCATTGAA
CTGAATGAAG CCTTCGCAGC GCAAGCTCTA GCCGTACTAA GAGAGTTAGG TGTCGATGAT
GATGACGCGC GTGTGAATCC CAATGGCGGA GCCATTGCTT TAGGCCACCC ACTAGGAATG
AGTGGCGCAC GATTAGTGAC AACAGCAGCT TATGAATTGC AACGTCGAAA AGGAAAATAT
GCCTTATGTA CCATGTGCAT AGGCGTTGGT CAGGGGATTG CCATTGTTTT AGAACGGTTG
TAA
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| Protein sequence | MKDVFIYDAV RTPIGRYGGA LSGVRADDLG ALPIKALMGR NPKVDWQNIE ELFYGCANQA
GEDNRNVARM SGLLAGLPIT VPGVTLNRLC GSGMDAVGTA ARAIKSGEMS LAIAGGVESM
SRAPLVINKA EKGFDRKMEL FDTTMGWRFI NVALKAEYGV DSMPETAENV AEAFSVSRAD
QDKFAYRSQQ KTAAAVDEGR FENEIVSVSV KRGKQHLEFD TDEHFRRETS IDGLSELSAP
FREGGSVTAG NASGINDGAC ALLLGDAEAQ ALYGLTPLAK VTAMATSGVE PRLMGIGPVS
ASRKALALAG LKIEQMDVIE LNEAFAAQAL AVLRELGVDD DDARVNPNGG AIALGHPLGM
SGARLVTTAA YELQRRKGKY ALCTMCIGVG QGIAIVLERL
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