Gene Swoo_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0218 
Symbol 
ID6114441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp270465 
End bp270992 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content46% 
IMG OID641631699 
Productphenylacetate-CoA oxygenase, PaaJ subunit 
Protein accessionYP_001758614 
Protein GI170724588 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID[TIGR02159] phenylacetate-CoA oxygenase, PaaJ subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0145597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTTA GCAGTGCAAC TCATTCGGCA ACAATAAACA CGGTCACCGT GGAATATGCA 
GCCAGAAGGA AATTCAGGTT AAATCATGAG CACGGTAAGA TTTTTGATCT CCTCGATGCG
GTTTATGATC CTGAGCTAAC TGGAGTGAGT TTGTGGGATC TGGGTGTTTT ACAAAATGTC
AGTCAGCAAG GCGCCCAATG GCTAGTGACC ATTTCCCCCA CTTACAGTGG CTGCCCTGCA
ATCGATATCA TGATTGAAGA CATTAAAGTC TGCCTTACCA ATGCGGGGAT GGAACCAGTA
AAGGTTGAGA CTCAACTTAG CCCAGCATGG ACAACAGACT GGGTATCACC TGCGGGAAAG
ACAGCAATGA TCAGTCACGG GATCGCAGCA TGTGAGTCAC AGGTTATCTG CCCTCAATGT
CATAGCCAGC ATGTCTCACG GTTAAGTCAA TTTGGCTCAA CCTCATGTAA AGCGCTATAC
CGTTGCCTAG ATTGCTTAGA GTCGTTTGAC TACTTTAAAC CCCTATAA
 
Protein sequence
MTLSSATHSA TINTVTVEYA ARRKFRLNHE HGKIFDLLDA VYDPELTGVS LWDLGVLQNV 
SQQGAQWLVT ISPTYSGCPA IDIMIEDIKV CLTNAGMEPV KVETQLSPAW TTDWVSPAGK
TAMISHGIAA CESQVICPQC HSQHVSRLSQ FGSTSCKALY RCLDCLESFD YFKPL