Gene Swoo_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0217 
Symbol 
ID6114440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp269324 
End bp270397 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content43% 
IMG OID641631698 
Productferredoxin 
Protein accessionYP_001758613 
Protein GI170724587 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0184042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATG AATTTTACCA GCTTAATATT GCTTCTTTAG ACCGTTCAAC ATCTGATTCA 
GTCGCGATAA CCTTTGATGT ACCTCAGGCT CTGCAATCGA CATTTCGTTT TAAACCAGGC
CAATACCTGA CGTTGAAGCA TGACATTGAT GGGCAAGAAA TACGTCGCTG CTATTCCATT
TCAGCGCCAG TATCGAGCCA TAAACTTGAA GTTGGAATTA AAAGCATTCC CGATGGGCTG
TTCTCTAACT TTGCCAATAA TCAATTGACC GTTGGTCAAT CATTAGCGGT ACTGCCGCCA
ACCGGTAATT TCATCTGCGA TCTAAAGCAG CACACAAATA TCTGTCTGCT TGCGGCGGGC
AGCGGGATCA CACCTATGTT ATCAATTGCA GAAAGCGTCC TCGAAAACAG TACCGAGAGC
CATATCAGCT TAGTTTATTC AAATAAGCAG ATGCAGAGCA TGATGTTCAG AGAGCGCCTC
TCCTTTTTAA AAAATAGGTA TATCAGCCGA TTTAACTTCA TCAATCTATT TAGCCGTGAA
GATTCTGAGG TTGAGTTGTT TAATGGCCGT TTAACCCCTG AAAAAATATC TGCATTGATC
AAGGCTGGGA TTGTTCAACT CGATGCTTTT GACTCGTTTT TTCTGTGTGG GCCCAATGAG
ATGGTCGACA GCATTCGACA GGTATTACTA GAAAAGAATA TTGATGCAGA CGCCATTAAA
TCTGAACTGT TTTTTGCCGG TGATATCAGT CAGGCATTAA ACCTTAAGCG ACAAGAGGAA
TACGGTGAGC GGATCAGACA GGTAAAACTG AAAATTGATG GACGTAAACT CAGTATCGAT
TTGATCTCCG GCGGCAAAAC CATCTTAGAT GCAGCCCTTG ATCAGGGTGC AGACCTGCCT
TTTTCATGCA AGGGAGGGGT GTGTGCGACA TGCAAAGCGA GAGTGATCAA AGGTAAAGTC
GAAATGGATT TGAATCACAG CTTAACCGAT GAAGAAATTA AACAAGGCAT GGTACTCACT
TGCCAATCTC ATCCTGTTTC AGATGATGTA GAAATCGATT TTGATGTGAC CTGA
 
Protein sequence
MNNEFYQLNI ASLDRSTSDS VAITFDVPQA LQSTFRFKPG QYLTLKHDID GQEIRRCYSI 
SAPVSSHKLE VGIKSIPDGL FSNFANNQLT VGQSLAVLPP TGNFICDLKQ HTNICLLAAG
SGITPMLSIA ESVLENSTES HISLVYSNKQ MQSMMFRERL SFLKNRYISR FNFINLFSRE
DSEVELFNGR LTPEKISALI KAGIVQLDAF DSFFLCGPNE MVDSIRQVLL EKNIDADAIK
SELFFAGDIS QALNLKRQEE YGERIRQVKL KIDGRKLSID LISGGKTILD AALDQGADLP
FSCKGGVCAT CKARVIKGKV EMDLNHSLTD EEIKQGMVLT CQSHPVSDDV EIDFDVT