| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0214 |
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| Symbol | |
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| ID | 6114437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 265854 |
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| End bp | 267944 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641631695 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001758610 |
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| Protein GI | 170724584 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00162373 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAATC CTCTTTGTCA TGTCCGTTAT CTGTGCATAG AAACCGGTAT TCAACTTAAC
GTCACCGATA ATAATACCTT AGCCGTCATT GAAATTAACT CTCCTCCAGT CAATGCGATT
TCTCAACAAC TTAGAGCTGA GTTATTGATT CTATTCCAAT CCCTGGCTTC ACAAGATTTA
CACTCAGTTT TACTCACCTG CACAGGTCGT ACTTTTGTAG CAGGTGCCGA TATAAAAGAG
ATGGACACAG AGCCACTTGA GCCACACCTT CCTGAGTTGA TAGCCACTAT AGTCCGCTTC
CCAAAACCCG TTATTGCCGC TCTACATGGC ACAGTACTCG GTGGAGGGTT GGAACTCGCC
CTAGCTTGCG ATTACCGTCT AGCAGTCAGC AAGACTAAAC TGGGATTGCC TGAAGTGAAT
TTAGGTATTA TTCCTGGTGC GGGTGGCACC TTGAGGCTAA TGAATTTAAT TGGCGTTAAA
GCTGCCATCG AATTTGCGTG TACAGGCAAA CCTCAAAATG CGGATGAGTG GCTAAATACG
GCGTTAATTC ATAAGCTGGT GCACAAAGGT GATCTCACAG AGCAAGCCTT AAGCTTTTGT
CGACAGCTGA CGCTAACAGA AAGCAAGCAA AACACTGAGG CCGACTTCTC AATTCAAGGA
CAATATATTG ATTGGGATAG CACAGAGAAA AGAGTTAAAC GTCTCGCAAA AGGAGTTGAA
GCACCTGCAC TATTACTCAA TGAAATCAAA GCAATATATA GCTTAGGTTT ATCTTTTGAA
CATGCACTGA AACGTCAACG TCGTTTATTT TTACAATTGC GCGACTCAGA CCAAGCCAAA
GCACTTCGGT ATGCTTTTTT TACCGAGAAA AAGAACCAAA AACTGGCAAC TTCAACATCA
TCCACCAGAA CTATAAATAC CGTCGGAGTC GTGGGCGCTG GTAACATGGG TGTAGGGATC
GCTCGCTGTT TTATCGATGC TGGCATGGAC TTGATATGGA TAGAGCAAAC CGAAGAAGCC
TTGCTACGAG GCATGGATAA TTTACGCAAA GGCTACCAGT CAAAAATAAC AAAAGGACAC
ATGACTGAGC AAGATCTAGA TGACAAGATG CAGCTAGTAA AAGGAAGTAC TGTCTACGAC
CGTTTAGCAC CTTGCGATCT GGTCGTTGAG GCTGCATTTG AAGATTTAGA AGTAAAAAAA
ATCATTTTCA AAGCTCTTGA TCAACACTGC AAAGATAGCG CGATTCTAGC GACTAACACC
TCATATCTGG ATATTAATAG CATTGCCAAA GTGACCAGTA GGCCTGATCA AGTAGTCGGT
TTGCACTTTT TTAGTCCAGC CCATGTAATG AAATTAATCG AAATAGTTAG AGCAGAGAAC
ACTGCCGATG ACGTGATTAA AACCATGTTG GCACTCGGTG TAAAACTTAG AAAATACCCC
GTTGAAGTAG GCGTATGCTT TGGATTTGCA GCCAATCGCA TGTACACTCG CTATGGACGC
GAAATTCAAC AGATGTTACT CGAAGGTAAC AGCATAGTGG CGATAGATGA AGCCATGACC
TCTTTTGGAA TGGCCATGGG TCCTTTAACT GTACAAGATC TCAGTGGGAT AGATATTGGG
TATCAAGCAA GAGCAAAACA AGCTGATAAA CCCTATGATC TTGGTTATTT TAGGCCCTCT
GCATCCATGG TTGAAAATGG ACGTTTGGGC CGAAAAACTC AGGCAGGCTT TTACCAATAT
TTAGCCTCTG GTGAGAAGGT AGAGTCACAA GAAGCTCAGT TATTAGTGGA TAACGAAGCA
AAAAAACTCT CAATAATCCC ACATCGGTTA ACAGCCGAGG CAATCCAACA AAGGGCGATG
TTAGCTCTGG TGAGCGAAGG TTTGCTTATC ATTGATGAGG GAATTGTAAA TGATATCAGT
TTACTCGATA TCATCTGGCT ACATGGCTAT GGCTTTCCTC GCTTTAAAGG AGGACCTATG
TACTGGGGCG CAAAATTAGG CTGTGCAGAC ATTGATGAAA AACTGCAATT ATTACGACAC
CAATACAGTG CAGATATTTG GCCTGAAGTC ACCCTAAGTA ACTTAAAATA A
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| Protein sequence | MNNPLCHVRY LCIETGIQLN VTDNNTLAVI EINSPPVNAI SQQLRAELLI LFQSLASQDL
HSVLLTCTGR TFVAGADIKE MDTEPLEPHL PELIATIVRF PKPVIAALHG TVLGGGLELA
LACDYRLAVS KTKLGLPEVN LGIIPGAGGT LRLMNLIGVK AAIEFACTGK PQNADEWLNT
ALIHKLVHKG DLTEQALSFC RQLTLTESKQ NTEADFSIQG QYIDWDSTEK RVKRLAKGVE
APALLLNEIK AIYSLGLSFE HALKRQRRLF LQLRDSDQAK ALRYAFFTEK KNQKLATSTS
STRTINTVGV VGAGNMGVGI ARCFIDAGMD LIWIEQTEEA LLRGMDNLRK GYQSKITKGH
MTEQDLDDKM QLVKGSTVYD RLAPCDLVVE AAFEDLEVKK IIFKALDQHC KDSAILATNT
SYLDINSIAK VTSRPDQVVG LHFFSPAHVM KLIEIVRAEN TADDVIKTML ALGVKLRKYP
VEVGVCFGFA ANRMYTRYGR EIQQMLLEGN SIVAIDEAMT SFGMAMGPLT VQDLSGIDIG
YQARAKQADK PYDLGYFRPS ASMVENGRLG RKTQAGFYQY LASGEKVESQ EAQLLVDNEA
KKLSIIPHRL TAEAIQQRAM LALVSEGLLI IDEGIVNDIS LLDIIWLHGY GFPRFKGGPM
YWGAKLGCAD IDEKLQLLRH QYSADIWPEV TLSNLK
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