| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0201 |
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| Symbol | |
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| ID | 6114424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 250287 |
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| End bp | 251762 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641631682 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_001758597 |
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| Protein GI | 170724571 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00197589 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000348094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCAAAGA AAGGTTTTTT CTCCTGGTTT CGTAAAGATA AGTCACAAGA TGAAGTGCAA
ACTCAGGAAG TTGAGAGTGT AACGGAGTCT CAAGAGAAGG CGCGTATTGA AGCGGAAGCT
GTAGAGCAGG CGCGTATCGA AGCGGAAGCT GTAGAGCAGG CGCGTACCGA AGCTGAAGCG
GTAGAGCAGG CGCGTATCGA GGTGGAAGCG GCAGAGCAGG CGCGTATCGA AGCGGAAGCT
GTAGAGCAGG CGCGTATTGA GGCTGAAGCG GCAGAGCAGG CGCGTATTGA AGCGGAAGCT
GTAGAGCAGG CGCGTATTGA GGCTGAAGCG GCAGAGCAGG CGCGTATTGA GGCGGAAGCG
GCAGAGCAGG CGCGTATTGA AGCGGAAGCG GCAGAGCAGG CGCGTATCGA AGCGGAAGCA
GCTGAGCAGG CGCGAAATGA TGCGGAAGCA GCAGAGCAGA CTCGTATTGA AGCTGAAGCG
GTAGAGCAGG CTGAAGTTGT TACCGAGGAG CGTCAACCAG AGCCTCAGGA GAAGCCAGCT
AAAGAGGGCT TTTTTGCTCG CCTTAAACGT GGGCTTAAGC GTACCAGTGA GAATATCGGT
AGTGGCTTTA TCGGCTTGTT TAAGGGCAAG AAGATCGATG ATGATCTTTT CGAGGAGTTA
GAGGAGCAGC TGTTGATCGC CGATGTGGGC GTTGAAACTA CGACTCGTTT GATTAGCAGC
CTAACAGAGC AAGCGAGCCG TAAGCAGCTT AAAGATGGTG AAGCCCTGTA TGAGCTGCTT
CGTGAAGAGA TGCAAAAAAC CTTAGAGCCA GCCTCTATCC CACTTGTGCC TGAAAATGCA
GATGGTCCAT TTGTTATCTT GATGGTAGGT GTGAACGGTG TGGGTAAAAC CACCACAATC
GGTAAGTTGG CTAAACAGTA TCAGGCTCAA GGTAAATCAG TTATGTTAGC GGCAGGGGAC
ACTTTCCGTG CTGCTGCGGT TGAGCAGCTA CAGGTATGGG GACAGAGAAA CGATATCCCT
GTTGTGGCTC AACATACCGG TGCCGACAGT GCATCTGTGC TATTTGATGC ACTTCAAGCC
GCTCGCGCTC GTAATGTGGA TGTATTGATT GCCGATACCG CAGGTCGATT GCAGAATAAA
TCTCACTTGA TGGACGAGCT TAAAAAAGTC GTTCGTGTGA TGAAAAAGCA AGATGAGAAT
GCCCCTCACG AGGTGATGTT AACCTTAGAT GCAAGCACTG GTCAGAATGC AATTAGTCAG
GCTGAGCTGT TTAAGCAAGC TGTAGGAGTG ACAGGTATCA CCATCAGTAA ATTGGATGGT
ACAGCGAAAG GTGGTGTTAT TTTCGCAATA GCTGATAAGT TTGGTATTCC TATTCGTCAT
ATTGGTGTTG GTGAACAGAT TGACGATCTA CGTACTTTCG ATGCTAAAGA CTTTATTGAT
GCGCTATTTA CACAAGAAGC CGACGAGAAA AAGTAG
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| Protein sequence | MAKKGFFSWF RKDKSQDEVQ TQEVESVTES QEKARIEAEA VEQARIEAEA VEQARTEAEA
VEQARIEVEA AEQARIEAEA VEQARIEAEA AEQARIEAEA VEQARIEAEA AEQARIEAEA
AEQARIEAEA AEQARIEAEA AEQARNDAEA AEQTRIEAEA VEQAEVVTEE RQPEPQEKPA
KEGFFARLKR GLKRTSENIG SGFIGLFKGK KIDDDLFEEL EEQLLIADVG VETTTRLISS
LTEQASRKQL KDGEALYELL REEMQKTLEP ASIPLVPENA DGPFVILMVG VNGVGKTTTI
GKLAKQYQAQ GKSVMLAAGD TFRAAAVEQL QVWGQRNDIP VVAQHTGADS ASVLFDALQA
ARARNVDVLI ADTAGRLQNK SHLMDELKKV VRVMKKQDEN APHEVMLTLD ASTGQNAISQ
AELFKQAVGV TGITISKLDG TAKGGVIFAI ADKFGIPIRH IGVGEQIDDL RTFDAKDFID
ALFTQEADEK K
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