Gene Swoo_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0196 
Symbol 
ID6114419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp236867 
End bp237847 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content44% 
IMG OID641631677 
Producthypothetical protein 
Protein accessionYP_001758592 
Protein GI170724566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.157282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTC CAAGAAGAAG TCAAATTAGT TTAGAAGATA CACCTATGTA TCATTGCTGC 
AGTCGTGTCA CGAGAAGAGC ATTCCTGTTT GGCGATGATG AACTCACTGG CAAGAACTAT
GACCACAGAC GTGATTGGGT CGAATCTCAG TTGCTGAAGC TAGCAGTGGT CTTTGCTATC
GATATCGCAG CCTATGCGGT GATGTCCAAT CACTTACACT TGGTGCTGAG AGTCGATATC
TATGAAGCGA ATGCTTGGAG TGATAGGGAG GTGGTTGAGC ATTGGCATAA CTTGTTTAAA
GGCACTGATA TCACTCAAAA GTTTGCTAAA GGTGAAGTGA TAGAAAGCTT TGAAGTTAAT
AGTTTAAAGC ACTCTATAGC GCAATATCGA AGTCGATTGA GTGATATTAG TTGGTTTATG
AGATGCTTAA ATGAGCCTAT TGCACGTATG GCGAATAAAG AAGACAAGTG CACGGGGCGG
TTTTGGGAAG GACGATTTAA ATCTCAAGCC CTGCTTGATG ATGCGGCCGT ATTGGCTTGC
ATGGCTTATG TTGACCTTAA CCCCATCAGA GCCAAGATGG CTACAACCCC AGAAAACTCA
AACTTCACCA GCATACAGCG ACGTATAAAA GCGGCACTAA ATGGCGAGCA GCCAACATCG
TTACTGCCAT TTGTGGGTAA TGAACGTAAC GAAATGCCAA AAGGACTGAT GTTTAACGCT
AAAGATTACC TGCAACTCGT TGATGATACA GGGCGTATTA TTAGACAAGA TAAACGTGGT
GCCATTAGCC AAACTTCACA GCGAATACTC GATAGACTCA ATATTCCTCA AGAGAACTGG
CTAAAGCTCT CGACTGACTT TGGCGATTTA TTTAAAGGAG CAGTAGGAAC ACTTCAAGAG
TTAGATGCTT TTTGTGAACA TCAAGAGAAA AAGCGCAGGC AAGGCGCTGC AAATTGTCAT
CGATGGCTAG ACAGCGCTTA G
 
Protein sequence
MPRPRRSQIS LEDTPMYHCC SRVTRRAFLF GDDELTGKNY DHRRDWVESQ LLKLAVVFAI 
DIAAYAVMSN HLHLVLRVDI YEANAWSDRE VVEHWHNLFK GTDITQKFAK GEVIESFEVN
SLKHSIAQYR SRLSDISWFM RCLNEPIARM ANKEDKCTGR FWEGRFKSQA LLDDAAVLAC
MAYVDLNPIR AKMATTPENS NFTSIQRRIK AALNGEQPTS LLPFVGNERN EMPKGLMFNA
KDYLQLVDDT GRIIRQDKRG AISQTSQRIL DRLNIPQENW LKLSTDFGDL FKGAVGTLQE
LDAFCEHQEK KRRQGAANCH RWLDSA