Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0196 |
Symbol | |
ID | 6114419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 236867 |
End bp | 237847 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641631677 |
Product | hypothetical protein |
Protein accession | YP_001758592 |
Protein GI | 170724566 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.157282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGTC CAAGAAGAAG TCAAATTAGT TTAGAAGATA CACCTATGTA TCATTGCTGC AGTCGTGTCA CGAGAAGAGC ATTCCTGTTT GGCGATGATG AACTCACTGG CAAGAACTAT GACCACAGAC GTGATTGGGT CGAATCTCAG TTGCTGAAGC TAGCAGTGGT CTTTGCTATC GATATCGCAG CCTATGCGGT GATGTCCAAT CACTTACACT TGGTGCTGAG AGTCGATATC TATGAAGCGA ATGCTTGGAG TGATAGGGAG GTGGTTGAGC ATTGGCATAA CTTGTTTAAA GGCACTGATA TCACTCAAAA GTTTGCTAAA GGTGAAGTGA TAGAAAGCTT TGAAGTTAAT AGTTTAAAGC ACTCTATAGC GCAATATCGA AGTCGATTGA GTGATATTAG TTGGTTTATG AGATGCTTAA ATGAGCCTAT TGCACGTATG GCGAATAAAG AAGACAAGTG CACGGGGCGG TTTTGGGAAG GACGATTTAA ATCTCAAGCC CTGCTTGATG ATGCGGCCGT ATTGGCTTGC ATGGCTTATG TTGACCTTAA CCCCATCAGA GCCAAGATGG CTACAACCCC AGAAAACTCA AACTTCACCA GCATACAGCG ACGTATAAAA GCGGCACTAA ATGGCGAGCA GCCAACATCG TTACTGCCAT TTGTGGGTAA TGAACGTAAC GAAATGCCAA AAGGACTGAT GTTTAACGCT AAAGATTACC TGCAACTCGT TGATGATACA GGGCGTATTA TTAGACAAGA TAAACGTGGT GCCATTAGCC AAACTTCACA GCGAATACTC GATAGACTCA ATATTCCTCA AGAGAACTGG CTAAAGCTCT CGACTGACTT TGGCGATTTA TTTAAAGGAG CAGTAGGAAC ACTTCAAGAG TTAGATGCTT TTTGTGAACA TCAAGAGAAA AAGCGCAGGC AAGGCGCTGC AAATTGTCAT CGATGGCTAG ACAGCGCTTA G
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Protein sequence | MPRPRRSQIS LEDTPMYHCC SRVTRRAFLF GDDELTGKNY DHRRDWVESQ LLKLAVVFAI DIAAYAVMSN HLHLVLRVDI YEANAWSDRE VVEHWHNLFK GTDITQKFAK GEVIESFEVN SLKHSIAQYR SRLSDISWFM RCLNEPIARM ANKEDKCTGR FWEGRFKSQA LLDDAAVLAC MAYVDLNPIR AKMATTPENS NFTSIQRRIK AALNGEQPTS LLPFVGNERN EMPKGLMFNA KDYLQLVDDT GRIIRQDKRG AISQTSQRIL DRLNIPQENW LKLSTDFGDL FKGAVGTLQE LDAFCEHQEK KRRQGAANCH RWLDSA
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