| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0195 |
|---|
| Symbol | |
|---|
| ID | 6114418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 235890 |
|---|
| End bp | 236453 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641631676 |
|---|
| Product | NapC/NirT cytochrome c domain-containing protein |
|---|
| Protein accession | YP_001758591 |
|---|
| Protein GI | 170724565 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.14908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTAC GGGCACTGTT TAAGCCAAGC GCAAAATATT CAATATTCGC CCTGTTAGTG
GTCGGTATTG TTGTTGGTGT CGTTGGCTAT TTTGCAACAC AACAAACTTT ACATGCGACA
AGTACAGATG AGTTCTGTAT GAGCTGCCAC AGCAACCACT CTTTGAAAGA TGAAGTGCTG
GCATCTGCTC ATGGCGGAGG AAGTGCTGGT GTGACGGTAC AATGTCAAGA TTGTCACTTG
CCACATAACC CAGTTAAGTA TTTAGTTAAG AAGATCATCG TATCTAAAGA TCTATATGGT
TACTTAACAA TTGACGGTTT TAACACTCAA GAGTGGTTAG ACGAAAACCG TAAAGAGCAA
GCAGATCTTG CACTTAAGTA CTTTAAAGAT ACCGATTCTG CTAACTGTCA GCACTGTCAC
ACTCGCATCT ATGAAAACCA GCCAGAAACG ATGAAGAAGA TGGCGAAGAG AATGCACGAG
CGTAACTTCC AGAAAGAGCC TGACAAGCGT AAGACCTGTG TCGACTGTCA TAAAGGCGTT
GCACACGTAT ATCCAAAAGG ATAA
|
|---|
| Protein sequence | MNLRALFKPS AKYSIFALLV VGIVVGVVGY FATQQTLHAT STDEFCMSCH SNHSLKDEVL
ASAHGGGSAG VTVQCQDCHL PHNPVKYLVK KIIVSKDLYG YLTIDGFNTQ EWLDENRKEQ
ADLALKYFKD TDSANCQHCH TRIYENQPET MKKMAKRMHE RNFQKEPDKR KTCVDCHKGV
AHVYPKG
|
|---|
| |