Gene Swoo_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0188 
Symbol 
ID6114411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp227207 
End bp228001 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content50% 
IMG OID641631669 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001758584 
Protein GI170724558 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAA ATCAATACGT TCATGGGCAA CCTTGCTGGA TAGAGCTTGC AAGTCGCGAC 
GCCCATGCTG GCAAACAATT TTATAGCACT CTCTTTGACT GGAAGGTGCA GGATATGCCA
ATCCCCAATG GGGTCTACTC TATGCTTGCC CTTGAGGTTG AGGGAGAGTG CTCAGATATT
GGCGCCGCCT ACCAGATGCC GGAAACCATG TCAGAGCAAG GCGCACCAAC TACTTGGACT
GTCTATTTTG CTGTCGATAA TGTCGATGCT ACTGTGGCTG CGGTGATCTC AAACGGTGGC
AACTTAGAGT TAGGCCCTCA TGATGTCGGC ACGGCTGGAC GGATGGCTCT GTTAAGCGAT
CCTGAGGGAG CAAGGTTTGC TATTTGGCAA GCTGGTGATC ATATTGGTGC TAAACGTCAT
GGTGAAAATG GCAGTTTATG TTGGGTGGAG CTGGCAAGCC GAGATGGTCA GGATGCTAAG
ACATTTTATA GCTCCTCATT GGGTTGGGAT TCTCGTCAAG ATCCAATGCC AGACTTTACC
TATACCGAGT GGTTGGTCGA AGATGTTCCC TTTGGCGGCA TGATGGAGAT GACCGAAGAG
TGGGGAGAGA TGCCTGCCCA TTGGATGCTC TATTTTGCGG TTGAGGATTG CGATAAAACT
GCAGAGATGG CGACAAGCCT AGGGGGCCAA ATCTGTGTTC CTCCAACCAA TATACCTGAG
GTGGGGCGTT TTAGTGTGAT TAGCGACCCC CAAGGTGGTT TCTTCTCCGT TATAACTCTG
AACTCAGTGG AGTAG
 
Protein sequence
MKVNQYVHGQ PCWIELASRD AHAGKQFYST LFDWKVQDMP IPNGVYSMLA LEVEGECSDI 
GAAYQMPETM SEQGAPTTWT VYFAVDNVDA TVAAVISNGG NLELGPHDVG TAGRMALLSD
PEGARFAIWQ AGDHIGAKRH GENGSLCWVE LASRDGQDAK TFYSSSLGWD SRQDPMPDFT
YTEWLVEDVP FGGMMEMTEE WGEMPAHWML YFAVEDCDKT AEMATSLGGQ ICVPPTNIPE
VGRFSVISDP QGGFFSVITL NSVE