Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0182 |
Symbol | |
ID | 6114405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 221045 |
End bp | 222301 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641631663 |
Product | aromatic amino acid transporter |
Protein accession | YP_001758578 |
Protein GI | 170724552 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAATC ATATGAATGC AGCCAAAGAT AAGGCTGCGG GTAAGTCTCT GCTTGGCGGA GCGATGATAG TTGCGGGTAC AGCGGTTGGT GCAGGAATGT TTTCCCTGCC TGTTGTTGGT GCCGGTATGT GGTTTAGCTA TTCAATTCTA ATGATGTTAG GTGTCTGGTT CTGTATGCTG GTTTCCGGCT TACTACTACT TGAAACCAAC CTTCATTTCG AGCCTGGCTC GAGTTTTGAT ACCTTGACGC GTGAAACTTT AGGTCAGTTT TGGCGAATAG TGAACGGCTT ATCTATCGCC TTTGTGCTCT ATATTTTAGC CTATGCCTAT ATCAGTGGCG GTGGCTCTGT CGTTAACCAT AGTCTGCAAG TGTCAGGTAT CGAGTTGCCT CAAAGCCTTG CTGGCTTAGT TTTCGCCTTA GGTTTGGCGT TTATTGTTTT TATCAGCACT AAGGCTGTCG ATAGGATCAC CACGATCATG CTCGGGGGGA TGATCATCAC CTTCTTCCTT GCAATCGGTG ATCTGCTGAT CGATATCGAT ACAGTGAAGT TGTTTGCACC TAATGGCGAG GACACTTATC TACCTTACAT TTTAGCTGCA CTGCCCTTTG GTCTTGTGAG TTTTGGCTAT CACGGTAATG TGCCGAGCCT GGTTAAGTAT TACGGCAAAA AGCCTAATAC GATCATCAAG GCGATACTGA TCGGCACCTT GATCGCATTT GTTATCTATG TCTGCTGGTT AGTGGCTACC ATGGGGAATA TTGCCCGTGG TGACTTCGTT AATATTATCG CCCAAGGCGG TAATATGGGG GTCTTGGTTT CGGCTCTGTC TGATGTGATG AGCAGTAGCT GGTTAACTAC CATGTTAACG ATTTTTGCAA ATCTAGCCGT TGCTTCTTCG TTCCTAGGGG TTACCTTAGG TTTGTTTGAT TTTCTGGCCG ATCTTTTTGG CTTCGATGAA TCCAGAGGTG GACGCTTTAA AACGGCCGCA GTGACCTTCC TACCACCGAC AGTGCTTGGA TTACTTTTCC CGAATGGCTT CTTGGTTGCC ATCGGTTTTG CAGCACTTGC GGCGACAGTT TGGACTGCGA TTGTACCAGC AATGATGGTG TACAAGATTA GAAAGAAGTT TCCTAATTCG ACCGGTTTTA AAGTTCCTGG CGGTAATGCG GTGATTGTCA TCGTAATGTT GTTCGGTATT ATTACCGGAG CCTGTCATTT ATTAGCGATG GCGGATCTAC TGCCTGTATA CGGGTAA
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Protein sequence | MANHMNAAKD KAAGKSLLGG AMIVAGTAVG AGMFSLPVVG AGMWFSYSIL MMLGVWFCML VSGLLLLETN LHFEPGSSFD TLTRETLGQF WRIVNGLSIA FVLYILAYAY ISGGGSVVNH SLQVSGIELP QSLAGLVFAL GLAFIVFIST KAVDRITTIM LGGMIITFFL AIGDLLIDID TVKLFAPNGE DTYLPYILAA LPFGLVSFGY HGNVPSLVKY YGKKPNTIIK AILIGTLIAF VIYVCWLVAT MGNIARGDFV NIIAQGGNMG VLVSALSDVM SSSWLTTMLT IFANLAVASS FLGVTLGLFD FLADLFGFDE SRGGRFKTAA VTFLPPTVLG LLFPNGFLVA IGFAALAATV WTAIVPAMMV YKIRKKFPNS TGFKVPGGNA VIVIVMLFGI ITGACHLLAM ADLLPVYG
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