Gene Swoo_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0181 
Symbol 
ID6114404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp218514 
End bp220937 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content46% 
IMG OID641631662 
Productglycerol-3-phosphate acyltransferase 
Protein accessionYP_001758577 
Protein GI170724551 
COG category[I] Lipid transport and metabolism 
COG ID[COG2937] Glycerol-3-phosphate O-acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAC AAGACTCCCT TTGGTTTAAA TCACTGCGCT GGCTTCAGAA AAAGTTGGTG 
CATACTATTG TTGTGCCGCA AGAACCGTTT AAGGATCTAA ATCTAGATCC TGAGAAACCG
CTCGTTTATG TGATGAAGAC TGAATCTCTC AGTGACATCG CAGCTCTCAG TGAGATCACG
GGAGAGCTAG GTTTACCTAG CCCTTATGAG CCATTAGAGG TTGAAGGGCG GTCAACGCCT
AGAGTGGTAT GCCTAGAGGG GGCTAAGCCT CTTATGGGGA AAAGGGAGAG TAATGAGTTC
TTCCTAAGTA GCTTTATGGA TCTGTTAAAG GCACATAAAG AGAGTCCAGA TCTCGATATT
CAACTGGTAC CTGTGAGTCT CTATTGGGGA AGAACGCCAG GTAAAGAGGA TGACACGATG
AAAGCCGCTG TGCTTGAGCG TGAGAATCCA ACTTGGTTGC GTAAATGTTT GATGATCCTA
TTTTTAGGCC GACATAACTT TGTTCAATTC TCCAATTCGG TCTCGATACG TTATATGGCC
GATGAGCATG GCACTGATAA GCGTATCGCA CATAAACTTG CCCGCGTAGC CCGAGTGCAC
TTTAGCCGTC AGCGAAAGGT GATGACAGGC CCAGTTTTAC CTAAGAGGCA GGCCCTTTTC
CATGCCTTGA TTAACTCAGA AAGTTTAAAG AGAGCGATTC AGGAGGAGGC GACGAGCAAG
AAGATTTCAG AGGTTGAAGC CAGAGCGAAG GCGATGGAGT ATCTGGATGA GATTGCTGCG
GATTACTCAG ACAGCTTAGT GCGTATTGCT GAGCGCTTCC TGACCTGGTT GTGGAATAAG
CTTTACAAAG GTATCAATAT TAAGGGAGCT GAACAGATCC GTCAGCTACA CCATGATGGC
CATGAGATCA TCTACGTGCC TTGTCACAGA AGCCATATGG ATTATCTGCT GCTCTCCTAT
ATTCTCTATT ACCAAGGTAT GGTTCCGCCT CACATTGCAG CGGGGATCAA CCTGAATTTC
TGGCCTGCAG GCCCTATGTT CCGCCGTGGT GGTGCCTTCT TTATTCGCCG TAGTTTCAGA
GGTAATAAAC TGTATACCGC TGTGTTTCGC GAATATCTGG ATCAACTTTT CACTAAAGGT
TACTCGGTCG AGTACTTCAC CGAAGGTGGA CGTTCAAGAA CCGGACGCCT ATTGGCACCT
AAAACCGGTA TGATCGCGAT GACGCTTAAC AGTGTACTTC GTGGAATGGA GCGCCCAGTG
ACTTTGGTGC CTGTCTACCT TGGTTACGAT CATGTAATGG AAGTGGCGAC TTACCATAAA
GAATTAAGTG GTAAGAAGAA AAAGAAAGAG TCGGTTTGGC AGGTTTTTGG TGCTTTGCGT
AAGCTAGGAA ACTTTGGTCA AGGCTATGTG AACTTTGGTA AGCCTATCAC CTTGCATAGT
TTTCTAAATG AGCAGGTTCC TGATTGGCGT GAGGAGATCG CGAGCGACCC TGAGCAGAAG
CCAACATGGT TGACCCCTGT GGTTAACACT CTTGCGAATC AAGTCATGAC CAATATCAAT
GACGCTGCGG CGGTGAGCTC AGTCACCTTG ACTAGCTTAG TTCTGCTGGC GTCAGAGCAA
AATGCTCTCG AGAGAACTCA GCTTGAGAAG CAGCTGGATC TCTATCTTAA GTTGCTAAAA
GATCTACCTT ATACCTCATA CACATCTGTT GTAGAAGGTG ATGGCAAGCA GCTAGTCACT
CAAGGCTTAG AGCTGAAGAA ACTACAGTTA GATAGCGACC CACTGGGTGA TATCGTCTCC
ATTGATGAGA GTATCTCCAT TGCGATGACC TATTACCGTA ATAACATTAT TCACTTAATG
ATTATTCCTT CACTGGTTGC TAGCTGTTTG ACTCAACATG AGCGGATCAC CAGAGATGAG
ATCAAAGCGA TTATTGCCGA CTTCTATCCT CTGCTTGAAG CTGAGCTGTT TATGGGTGTT
GAAGATACCG ATAAGTTAGT CGAGCAGATA TTAGATCTGT TTATTGAGCA GCAGTTGATC
CGTGAAGATA CTGGTTTCAG TGTGGTTGAG ACCAGCATTA ATCAGTTATT GCTGCTTGCT
GGCACTGTGA GTGAGACGTT GCAGCGTTAC GCCATCATCT TTAATCTGTT AGCCGATTTC
CCAGAGATGG AGCGTTCAGA TCTAGAGGCT GAAAGTCATA AATTGGCGAA GCGTTTAGGT
GCCCTTCATG GCATTACCGC ACCTGAGTTC TATGATAAGA ATCTTTATAG AACCTTGAGT
GTGAAGCTTA AAGATCTAGG TTACCTCAAA GATAACGGTA ATAAAGCCGA TGTTGAGAGA
GTTCGTGCGT CAGCCAATGG CTTATTGAGG TCTTCTGTTA GGCAGACCAT AGTCGATAGT
GTTGCAGCGG AGCGCTCTGC TTGA
 
Protein sequence
MSKQDSLWFK SLRWLQKKLV HTIVVPQEPF KDLNLDPEKP LVYVMKTESL SDIAALSEIT 
GELGLPSPYE PLEVEGRSTP RVVCLEGAKP LMGKRESNEF FLSSFMDLLK AHKESPDLDI
QLVPVSLYWG RTPGKEDDTM KAAVLERENP TWLRKCLMIL FLGRHNFVQF SNSVSIRYMA
DEHGTDKRIA HKLARVARVH FSRQRKVMTG PVLPKRQALF HALINSESLK RAIQEEATSK
KISEVEARAK AMEYLDEIAA DYSDSLVRIA ERFLTWLWNK LYKGINIKGA EQIRQLHHDG
HEIIYVPCHR SHMDYLLLSY ILYYQGMVPP HIAAGINLNF WPAGPMFRRG GAFFIRRSFR
GNKLYTAVFR EYLDQLFTKG YSVEYFTEGG RSRTGRLLAP KTGMIAMTLN SVLRGMERPV
TLVPVYLGYD HVMEVATYHK ELSGKKKKKE SVWQVFGALR KLGNFGQGYV NFGKPITLHS
FLNEQVPDWR EEIASDPEQK PTWLTPVVNT LANQVMTNIN DAAAVSSVTL TSLVLLASEQ
NALERTQLEK QLDLYLKLLK DLPYTSYTSV VEGDGKQLVT QGLELKKLQL DSDPLGDIVS
IDESISIAMT YYRNNIIHLM IIPSLVASCL TQHERITRDE IKAIIADFYP LLEAELFMGV
EDTDKLVEQI LDLFIEQQLI REDTGFSVVE TSINQLLLLA GTVSETLQRY AIIFNLLADF
PEMERSDLEA ESHKLAKRLG ALHGITAPEF YDKNLYRTLS VKLKDLGYLK DNGNKADVER
VRASANGLLR SSVRQTIVDS VAAERSA