| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0180 |
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| Symbol | |
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| ID | 6114403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 217677 |
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| End bp | 218294 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641631661 |
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| Product | LexA repressor |
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| Protein accession | YP_001758576 |
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| Protein GI | 170724550 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGACCTT TAACACCACG ACAAGCTGAA ATTCTTGAAC TAATTAAATG CAATATTGCC
GAAACAGGCA TGCCTCCAAC CCGTGCAGAA ATTGCTAAAC GTTTAGGTTT TAAAAGCGCC
AACGCTGCTG AGGAACACCT AAAGGCTCTA GCTAAAAAGG GCTGTATTGA GATCATTCCT
GGTACATCTC GTGGTATTAG GTTAGCTCAA ACAGAGGAGC TTGAAGAGCA AGGCTTACCT
TTGATAGGCC AAGTTGCAGC TGGGGAGCCT ATCCTAGCTC AAGAGCATGT TGAACAGCAT
TATCAAGTTG ATCCAAATAT GTTCCATCCA AGTGCCGACT TTCTACTTAG GGTACGTGGC
GACAGCATGA AAGATATCGG TATTCTCGAA GGAGATCTTC TGGCTGTCCA TAAGGCTGAG
CAAGCAAGAA ACGGTCAGGT TGTCGTTGCC CGTGTTGAAG ATGATGTAAC AGTTAAACGC
TTCGAGAAAA AAGGCAGTAC TGTTTACCTT CATGCAGAAA ATGAAGATTA CAGTCCTATA
GTCGTTGATC TAACTAACCA AAGCCTAAGT ATTGAAGGAT TGGCTGTCGG TGTTATTCGC
AATGGAGATT GGCAATGA
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| Protein sequence | MRPLTPRQAE ILELIKCNIA ETGMPPTRAE IAKRLGFKSA NAAEEHLKAL AKKGCIEIIP
GTSRGIRLAQ TEELEEQGLP LIGQVAAGEP ILAQEHVEQH YQVDPNMFHP SADFLLRVRG
DSMKDIGILE GDLLAVHKAE QARNGQVVVA RVEDDVTVKR FEKKGSTVYL HAENEDYSPI
VVDLTNQSLS IEGLAVGVIR NGDWQ
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