| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0178 |
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| Symbol | |
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| ID | 6114401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 215028 |
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| End bp | 216569 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631659 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_001758574 |
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| Protein GI | 170724548 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAAAG CGCTGTATTG TTTTCTGGCG TTGCTGTTTA CGCCACCCAT GTTGGCATCA
GAGATGCCCT TGAATATGAC TCAAGGGGTT ACGGAGATCA GTGGTCAGGT GTACAACCTG
CACATGATCA TCCTATATAT CTGTTGTGCC ATCGGAATCT TGGTCTTTGG TGTGATGATC
TATTCCATGA TCAATCACAG AAAATCCAAA GGTGCGATTG CGGCTAATTT TCACGAAAGT
ACAAAGGTTG AGATAGCTTG GACCGTTGTG CCTTTTATCA TACTTATTTT AATGGCAATA
CCCGCCACTA AAACCCTGAT CGCAATGGAA GATCCTTCCG ATGCCGATAT CACAATTAAA
GTTACCGGCT CTCAATGGAA ATGGCATTAC AGCTATTTTG ATGAAGATAT CGAATTTTAC
AGCTTACTCT CCACTCCCAG AGAACAGATC GATGGCACAG AGGCAAAAGG AGAGAACTAT
CTCCTTGAGG TTGATAACCC CTTAGTTCTT CCAATCAACA AGAAAGTGCG TTTTCTTATG
ACTTCAGAAG ATGTCATCCA TTCGTGGTGG GTGCCCGCTT TCGCTGTTAA AAAAGATGCC
AATCCAGGAT TCATTAATGA AGCTTGGACA CGTATAGACA AAACAGGAAC TTACCGAGGC
CAATGTGCTG AGTTATGTGG CAAAGACCAT GGCTTTATGC CAATTGTGGT CGAAGCAGTT
TCTGAAGCAG ATTTCGATAC TTGGTTAGTT GAGCAGAAGA GTAAAGCAAG CTCTGCTGCC
GCAGAAGCCC AAGCAGCATT GAGTAAAACC TTGAGTATGG ATGAACTAAT GACTCAAGGA
GAACAGGTAT ACATGGCAAA CTGCGCTGCA TGTCACCAAC CGAACGGTGC GGGTCTTCCT
GGGGTGTTTC CCTCTCTTAT TGGCAGTCCT CTGATTAAAG GCGCTGTCGC AGGTCATGTT
GATATTGTTT TAAATGGTAA GACTGGCACT GCAATGCAAG CCTTCGCTAA GCAGTTAACT
GCAACAGAAA TTGCGGCTGT GGTTACCTAT GAGCGTAATG CTTGGGGCAA TGACTCTGGT
GATACTGTTC AAGCGGCAGA TATCAGCTCC GCGAGCCCAG CTTCCGCAAC ACCGAGCGAG
TCAGAAGCTG CAGTTCCAGT AACCTTACCT GAGATTGAGG AGGCCGCTGC AGAAGTGGTC
GAAGAGGTTA AAGCCGTTGT ATTAGATGAC TTAACCATGG ATGAACTCAT GGCTATGGGC
GAGAAGGTCT ATATGACCAA CTGCGTTGCT TGTCATCAGG CTGCAGGAAC AGGCCTCCCT
GGCGCCTTCC CTTCATTAGT AAACAGCCCA GTGATCACAG GCCCAGTAAC GGGCCACCTT
GATATGGTTA TCAAGGGTAA ACCCGGAACC GCTATGCAGG CTTTCGGGGC ACAATTAACG
CCGCAAGAGA TTGCAGCCGT GATCACTTAT GAACGAAACG CATGGGGTAA CAACACAGGC
GATATGGTTC AGGCTGCTGA TGTTAATCAG CATGGTCAAT AG
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| Protein sequence | MKKALYCFLA LLFTPPMLAS EMPLNMTQGV TEISGQVYNL HMIILYICCA IGILVFGVMI
YSMINHRKSK GAIAANFHES TKVEIAWTVV PFIILILMAI PATKTLIAME DPSDADITIK
VTGSQWKWHY SYFDEDIEFY SLLSTPREQI DGTEAKGENY LLEVDNPLVL PINKKVRFLM
TSEDVIHSWW VPAFAVKKDA NPGFINEAWT RIDKTGTYRG QCAELCGKDH GFMPIVVEAV
SEADFDTWLV EQKSKASSAA AEAQAALSKT LSMDELMTQG EQVYMANCAA CHQPNGAGLP
GVFPSLIGSP LIKGAVAGHV DIVLNGKTGT AMQAFAKQLT ATEIAAVVTY ERNAWGNDSG
DTVQAADISS ASPASATPSE SEAAVPVTLP EIEEAAAEVV EEVKAVVLDD LTMDELMAMG
EKVYMTNCVA CHQAAGTGLP GAFPSLVNSP VITGPVTGHL DMVIKGKPGT AMQAFGAQLT
PQEIAAVITY ERNAWGNNTG DMVQAADVNQ HGQ
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