Gene Swoo_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0176 
Symbol 
ID6114399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp212830 
End bp213393 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content43% 
IMG OID641631657 
Productcytochrome C oxidase assembly protein 
Protein accessionYP_001758572 
Protein GI170724546 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3175] Cytochrome oxidase assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAGG CAGAATCGAA TAAAAAGCTG ATCTCTATGT TGATAGCGGG TGCTATTGGC 
ATGTTCGGCT TCGGTTTTGC CTTAGTTCCT CTCTATGATG TCCTGTGTGA GCAACTAGGA
ATAAATGGCA AAACCAGTAA TACAGCAAGC AGCTATCAAG CTATGACCAT AGATAAAAGC
CGAACGGTTA CCGTTGAATT TATGGCACAG ATACAGAGTG ATATGCCTTG GGAGTTTACA
CCTGAGATGA AACGAATGCA GGTTCATCCA GGTGAGTTAA TAAGAACTAA CTTTAAAGCG
ATAAACCTCT CAATGGAGGA GACGCTTGGA CAGGCAATTC CATCTGTATC CCCAGGTCAA
GGAGCGGCTT ACTTTAATAA AACAGAGTGC TTTTGCTTTA ATCAACAGAG ATTAACGGCC
AAAGCCAGCG CAGAGTTACC GCTGATATTT TTTGTGGATC CGGATTTACC AGAATCCATA
TCAACATTGA CTCTCTCTTA TACCCTCTAC AACATCACAG ATCGTGGATA TGTTGATGCG
ATAGAGCAAG GAGCAGCAAG ATGA
 
Protein sequence
MEKAESNKKL ISMLIAGAIG MFGFGFALVP LYDVLCEQLG INGKTSNTAS SYQAMTIDKS 
RTVTVEFMAQ IQSDMPWEFT PEMKRMQVHP GELIRTNFKA INLSMEETLG QAIPSVSPGQ
GAAYFNKTEC FCFNQQRLTA KASAELPLIF FVDPDLPESI STLTLSYTLY NITDRGYVDA
IEQGAAR