Gene Swoo_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0175 
Symbol 
ID6114398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp211958 
End bp212833 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content45% 
IMG OID641631656 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001758571 
Protein GI170724545 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTA AGCACGAACA TTACTATGTC CCAGCCCAAA GCGCCTGGCC CATTATTGGC 
GCAATAGGCC TATTTCTTAT CGCCTTCGGC GCGGGAAGCT ATGTACAACA ACTCAATACA
GAGAGTAGTA GCGGCGGATA TATACTACTC GCAGGAATCG CCGTCATCAT CTATATGATT
TTTGGCTGGT TCAGAACCGT TATCGCCGAG TCTATGAGTG GACTTTATTC CCAACAAATG
GATCGTTCAT TCAGACAGGG AATGAGCTGG TTTATCTTCT CTGAGGTTAT GTTTTTTGCG
GCATTTTTTG GCGCTCTGCT CTACGCCAGA ATGATTGCAG TACCTTGGTT AGGTGGTGAT
TCTAATAATG CTATGACCAA CGAAGTACTT TGGCCTGGAT TTGAAGCGAT ATGGCCTTTA
GTCAAAACTC CTGACGGTAC AACGACCCAA GCAATGGGAT GGACTGGCTT ACCCCTTTAC
AACACCCTCA TACTTCTCAC CTCTTCAATC ACCTTGCATA TGGCCCATGT TAGCCTTGAG
AAAGGAAAAC GCTCGGCAAT TTCAGTCTGG TTAGGAATAA CGATTTTACT TGGATTTGCC
TTCTTAGGTC TGCAAGTAGA AGAGTATGTT CATGCCTATC AGGAGATGGG ATTAACCTTA
GATTCTGGCG TCTACGGCAA CACCTTCTTC CTGCTAACAG GCTTTCACGG TATGCATGTC
ACGCTGGGAA CTGTATTTTT AATCGTACTC TTTTTCCGGG TTTTAAAAGG ACATTTCACA
CCTGATAAGC ACTTCGCATT TCAGGCAGGA AGCTGGTATT GGCACTTCGT TGACGTAGTT
TGGTTATGCC TATTTATCTT TGTCTACGTC CTTTAA
 
Protein sequence
MTTKHEHYYV PAQSAWPIIG AIGLFLIAFG AGSYVQQLNT ESSSGGYILL AGIAVIIYMI 
FGWFRTVIAE SMSGLYSQQM DRSFRQGMSW FIFSEVMFFA AFFGALLYAR MIAVPWLGGD
SNNAMTNEVL WPGFEAIWPL VKTPDGTTTQ AMGWTGLPLY NTLILLTSSI TLHMAHVSLE
KGKRSAISVW LGITILLGFA FLGLQVEEYV HAYQEMGLTL DSGVYGNTFF LLTGFHGMHV
TLGTVFLIVL FFRVLKGHFT PDKHFAFQAG SWYWHFVDVV WLCLFIFVYV L