Gene Swoo_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0173 
Symbol 
ID6114396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp210889 
End bp211584 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content47% 
IMG OID641631654 
Producthypothetical protein 
Protein accessionYP_001758569 
Protein GI170724543 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGTTA TACTTGCTAC TGTGAGTCTG TTTTTGCTTC TGGTCAAGCT AGGTTTCTGG 
CAGTTATCCC GCGCAGAGTT AAAAGAGGAG CTACAATCTC AACTAACCTC TAGGCAAGCC
GCGGCTCCGC TCTCATATCG TAAACTGCTT TCGCTTCCTG CGAGCGAGCC ACTCACAGGT
TACAAACTTA GTACCACTGT CACCCCAGTG GGAAACAAAG TGTTTTTACT CGACAATCAA
ATCTTTAATG GTCAAGTTGG CTACCTTGCA CTGCAAGTTA TGCAGGTCAA TCCCATCGAC
CCTTGGTTAC TGGTTGAACT CGGATTTGTC CCTGCTGGCA ATGACAGAAG AGTGCTCCCT
AAGCTGCCGC ACATTAATCA ATCTCAGACC TTCACGGGGC GCCTTTATCA GAAACAAGCG
AACCCTATGA GCTCAGATCT TTTTGCCGAA GAGGGATGGC CTAAAAGAGT TCAGAACTTA
AATATTTCAC AGATAGAAAC CACATTGAAC CATCCCGTGG CATTAGCAGT GCTTCAACCA
GAGAGCATTA AGGGAATCAA CCTGCCCCAT CCATGGCAAC CGATCCCCCT CTCGGCTCAA
AAACACTTAG GTTATGCCCT CCAGTGGTTT TCTATGGCTG TTGCATTTGC ACTTCTCGTG
TTCTACTTCA TCAGAGTCAG GTTAAAAAAG AAATAG
 
Protein sequence
MLVILATVSL FLLLVKLGFW QLSRAELKEE LQSQLTSRQA AAPLSYRKLL SLPASEPLTG 
YKLSTTVTPV GNKVFLLDNQ IFNGQVGYLA LQVMQVNPID PWLLVELGFV PAGNDRRVLP
KLPHINQSQT FTGRLYQKQA NPMSSDLFAE EGWPKRVQNL NISQIETTLN HPVALAVLQP
ESIKGINLPH PWQPIPLSAQ KHLGYALQWF SMAVAFALLV FYFIRVRLKK K