Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0173 |
Symbol | |
ID | 6114396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 210889 |
End bp | 211584 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641631654 |
Product | hypothetical protein |
Protein accession | YP_001758569 |
Protein GI | 170724543 |
COG category | [S] Function unknown |
COG ID | [COG3346] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGTTA TACTTGCTAC TGTGAGTCTG TTTTTGCTTC TGGTCAAGCT AGGTTTCTGG CAGTTATCCC GCGCAGAGTT AAAAGAGGAG CTACAATCTC AACTAACCTC TAGGCAAGCC GCGGCTCCGC TCTCATATCG TAAACTGCTT TCGCTTCCTG CGAGCGAGCC ACTCACAGGT TACAAACTTA GTACCACTGT CACCCCAGTG GGAAACAAAG TGTTTTTACT CGACAATCAA ATCTTTAATG GTCAAGTTGG CTACCTTGCA CTGCAAGTTA TGCAGGTCAA TCCCATCGAC CCTTGGTTAC TGGTTGAACT CGGATTTGTC CCTGCTGGCA ATGACAGAAG AGTGCTCCCT AAGCTGCCGC ACATTAATCA ATCTCAGACC TTCACGGGGC GCCTTTATCA GAAACAAGCG AACCCTATGA GCTCAGATCT TTTTGCCGAA GAGGGATGGC CTAAAAGAGT TCAGAACTTA AATATTTCAC AGATAGAAAC CACATTGAAC CATCCCGTGG CATTAGCAGT GCTTCAACCA GAGAGCATTA AGGGAATCAA CCTGCCCCAT CCATGGCAAC CGATCCCCCT CTCGGCTCAA AAACACTTAG GTTATGCCCT CCAGTGGTTT TCTATGGCTG TTGCATTTGC ACTTCTCGTG TTCTACTTCA TCAGAGTCAG GTTAAAAAAG AAATAG
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Protein sequence | MLVILATVSL FLLLVKLGFW QLSRAELKEE LQSQLTSRQA AAPLSYRKLL SLPASEPLTG YKLSTTVTPV GNKVFLLDNQ IFNGQVGYLA LQVMQVNPID PWLLVELGFV PAGNDRRVLP KLPHINQSQT FTGRLYQKQA NPMSSDLFAE EGWPKRVQNL NISQIETTLN HPVALAVLQP ESIKGINLPH PWQPIPLSAQ KHLGYALQWF SMAVAFALLV FYFIRVRLKK K
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