| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0170 |
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| Symbol | |
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| ID | 6114393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 208139 |
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| End bp | 209047 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631651 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001758566 |
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| Protein GI | 170724540 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC CACTTTCTAT CTCGTCAAGT GACACCCAGA GTCAGCCACT CCAATGGCGC
GCCTATTATG AGATGACAAA GCCTAAAGTT GTCGCCTTAA TGCTACTAAC TGTTCTAGTG
GGAATGTGTC TGGCACTACC CGGGGCTGTG CCATTACAGC CGCTGATCTT TGGACTTCTA
GGTATCGGCA TGATGGCTGG CGCAGCAGCC GCCTTTAACC ATTTAATCGA TCGACGCATC
GATGGATTGA TGGCTCGCAC CTATAACAGA CCTCTACCTA AGGGACGTGT TTCGATAACG
AAAGCGTTAA CCTTCTCTAT CTCTCTTGCT GTACTAGGCT TTGTTTTACT CTACACCTTG
GTCAATGAGT TAACCGCTTG GTTAACCTTC GCCAGCTTAC TCGGTTATGC TGTTGTCTAC
ACCGCTTACC TCAAACGAGC CACGCCGCAG AATATTGTTG TAGGGGGGTT AGCGGGAGCT
ATGCCACCAT TATTAGGCTG GACATCGGTG ACTGGAGAGT TTCACGGCAA CGCCCTGTTA
CTGGTCATCA TTATTTTTGC TTGGACCCCG CCCCACTTTT GGGCATTAGC TATCCATAGA
AAGGCTGAAT ACGCCAAAGT GGATATCCCC ATGCTACCAG TCACTCATGG TACAGAATTT
ACCAAAACCT GTATCTTGCT TTACACCATA CTGCTTGCAA TCGCATGCCT TCTCCCAGTT
TTGGTTGGCA TGTGTGGCCC ATTATATCTG GTAGGTTCGA CACTTTTGAG TTGCGGCTTT
ATCTATAAAT CCTGGGAACT AAAATTTGAT GATAAACCTG GTTTGGCGAT GCAAGTTTTC
CGCTTCTCCA TCTATCACTT AATGTTGTTA TTTATCGTGC TTTTAGTCGA CCACTACCTT
TGGGTTTAA
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| Protein sequence | MAKPLSISSS DTQSQPLQWR AYYEMTKPKV VALMLLTVLV GMCLALPGAV PLQPLIFGLL
GIGMMAGAAA AFNHLIDRRI DGLMARTYNR PLPKGRVSIT KALTFSISLA VLGFVLLYTL
VNELTAWLTF ASLLGYAVVY TAYLKRATPQ NIVVGGLAGA MPPLLGWTSV TGEFHGNALL
LVIIIFAWTP PHFWALAIHR KAEYAKVDIP MLPVTHGTEF TKTCILLYTI LLAIACLLPV
LVGMCGPLYL VGSTLLSCGF IYKSWELKFD DKPGLAMQVF RFSIYHLMLL FIVLLVDHYL
WV
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