| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0162 |
|---|
| Symbol | |
|---|
| ID | 6114385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 198549 |
|---|
| End bp | 199571 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641631643 |
|---|
| Product | response regulator receiver modulated CheB methylesterase |
|---|
| Protein accession | YP_001758558 |
|---|
| Protein GI | 170724532 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAG TCTTAGTCGT TGATGACTCA CCATTAGTAA GACAACTACT GACCCACTTA
CTAAGCGATG CGCCAGATAT CAAGGTTGTC GGTACTGCAG AAGATCCCTA CGAAGCAAGA
GAACAGATAA AAAGGCTGCA TCCTGATGTG CTGACTCTGG ATATAGAGAT GCCAAAAATG
GATGGGATCG CTTTTCTTAG AAACCTGATG AAGCTTAAAC CTATGCCAGT CATCATGGTC
TCAACCCTCA CAGAAAAAGG CGCAGCAGTC ACCTTAGAAG CATTATCTAT CGGCGCTGTA
GATTTTATTT TAAAGCCTAA ATCTGATCTC ACCAGCAGGC TAATGGAGTA CAGGGAGGAG
CTGATTGAAA AGATTCATTT TGCCTCCAAA AGCACCATTC GGCCATATAC TCCAATACCT
AAGCCAAGCA GCGACAAACA GAAATCAACC TATTCACGAA ATAAGGTGAT CGCTATAGGA
GCATCAACAG GGGGGACCGA GGCGATTCAA CGTTTAATCT GCCAGCTCCC ACATGACATA
TCTCCTATTG TCATCGCCCA GCATATTCCT GCAGCCTTTA GCACCTCATT TGCTAAGCGC
CTTAATAGTA ATGCAAGCAT GACTGTCATT GAAGCTCAGG GAGGAGAGCT ATTAAAACCA
GGTACAGCCT ATTTAGCACC AGGTAGTGCG CACTTGGTGG TAGAAAGAAA GGGGATGTCC
CTTTATACCA AACTGCTAGA TACAGACCCT GTTAACCGCC ATAGACCCTC TGTTGACGTG
CTTTTTGATA GTGTTGCAGA GTCGGTAGGC AAATCTGCAT TAGGGGTTAT TCTCACTGGA
ATGGGCAAAG ATGGCGCCAA AGGCTTACTT AACATGAAAA ATCAAGGCTC TTTCACCGTG
GCTCAAGATG AAGCCAGTTC TGTCGTTTGG GGAATGCCTG GCGCTGCGGT CGATATTGAA
GCTAGCAGTG AGATCCTACA TATCGATAGG ATCCCACAAA AAATTCTATC TCTATTGAAA
TAA
|
|---|
| Protein sequence | MIKVLVVDDS PLVRQLLTHL LSDAPDIKVV GTAEDPYEAR EQIKRLHPDV LTLDIEMPKM
DGIAFLRNLM KLKPMPVIMV STLTEKGAAV TLEALSIGAV DFILKPKSDL TSRLMEYREE
LIEKIHFASK STIRPYTPIP KPSSDKQKST YSRNKVIAIG ASTGGTEAIQ RLICQLPHDI
SPIVIAQHIP AAFSTSFAKR LNSNASMTVI EAQGGELLKP GTAYLAPGSA HLVVERKGMS
LYTKLLDTDP VNRHRPSVDV LFDSVAESVG KSALGVILTG MGKDGAKGLL NMKNQGSFTV
AQDEASSVVW GMPGAAVDIE ASSEILHIDR IPQKILSLLK
|
|---|
| |