| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0161 |
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| Symbol | |
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| ID | 6114384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 197504 |
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| End bp | 198532 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641631642 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001758557 |
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| Protein GI | 170724531 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAA GCATGCTAGT AATTCTGTCT GCAATGATCT GTTTTTCAGC GCAGGCAGCT
GTGATTTTAC AATATCACCA TGTTTCAGCT TCAACACCCG CTATTACTAG TGTGACACCA
GAACAGTTTC GTGAGCAGAT GCAGTATTTA GCTGAAAATG ATTTTATTGT TAAACCGCTT
TCTCAGGTTG TAGATGCGAT AAAGGCAGAG CAGGCGATTC CTGATAAAAC TGTGGTAATA
ACCTTTGATG ATGGCTATCG AAGTATCGCC AAAACAGCCC ATCCTATTTT AAAGGAATAT
GGTTTTCCCT ACACCTTATT TGTCTCTATT GAGCCGATAA AAGCAAAGTA TCGTGAGATG
ATGAGTTGGG AAGAGCTTGT TTTACTGTCG AAGGAGGGGG CCGAAATTGC AAACCATAGT
TGGGCTCATG AGCACTTGAT TCGAAAGCTC GAAGGAGAGA CGCAGGAGAA GTGGCTTGCT
AGAGTGGAGG AGAATATTTT AAAGACGGAG CGGGAGATAG CGTTAGCTAC TGGCCAAAAC
CATAAGATGC TAGCTTATCC GTATGGTGAG TATAACCAAG CGATTGAGTC AATGCTTGCA
CGCCATGGCT TTATTGGTTT AGGTCAGCAA TCTGGGGCTG CGGGACACTA CTCATCGCTT
ACTGCTTTAC CTCGATTTCC TGTTGCCGGA GTTTATGCGG ATTTAACTAG TTTGAAAGTA
AAGTTACACA GTTTAAATAT GCCGGTTTTA TCGCAGAATA TGAGTGATCC TGAGCTGAAA
AATGGTCACT GGAGGCCTGA GTTAAAAGTG ACTTTGGATA TCAGTGATAT CTATCCACAT
CAGATGATGT GCTATATCCA AGGTCAAGGC GCAAAAGCAC CACTTTGGCT TAGTGGGAAT
GAGTTTAGTA TAAGGGCAGA ATTAGATCTT CCAGTTGGAA GATCCCGTTA TAACTGCACT
GTACCCAGTA AAAGTAGAAC TGGCTATTAT TGGTTTTCAC AGGCTTGGGT GAGAAGTGCC
AGTGAATAA
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| Protein sequence | MFKSMLVILS AMICFSAQAA VILQYHHVSA STPAITSVTP EQFREQMQYL AENDFIVKPL
SQVVDAIKAE QAIPDKTVVI TFDDGYRSIA KTAHPILKEY GFPYTLFVSI EPIKAKYREM
MSWEELVLLS KEGAEIANHS WAHEHLIRKL EGETQEKWLA RVEENILKTE REIALATGQN
HKMLAYPYGE YNQAIESMLA RHGFIGLGQQ SGAAGHYSSL TALPRFPVAG VYADLTSLKV
KLHSLNMPVL SQNMSDPELK NGHWRPELKV TLDISDIYPH QMMCYIQGQG AKAPLWLSGN
EFSIRAELDL PVGRSRYNCT VPSKSRTGYY WFSQAWVRSA SE
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