| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0159 |
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| Symbol | |
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| ID | 6114382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 195501 |
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| End bp | 196079 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641631640 |
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| Product | putative DNA uptake protein |
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| Protein accession | YP_001758555 |
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| Protein GI | 170724529 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown |
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| COG ID | [COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains |
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| TIGRFAM ID | [TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR03341] IscR-regulated protein YhgI |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCACCA TTTCCGATGC CGCTCAGGCT CATTTTGTTA ACTTATTAGC AGATCAGCCT
GAAGGAACTC ATATTCGTGT ATTCGTAATT AGCCCTGGTA CAGCGACAGC TGAGTGTGGG
GTTTCATATT GTCCACCTGA TGCTGTTGAG GCCGACGATA TGGAGTTAGA ATACAATGGC
TTTAATGCCA TGGTCGATGA GAAATCAGCG CCTTTCCTTG AAGATGCCAC GATCGATTTT
GTTACCGATC AGCTTGGTTC ACAATTAACG CTAAAAGCGC CAAATGCAAA AATGCGTAAA
GTCGCTTCAG ATGCGTCGCT TAATGAACGT ATTGAATATG TGATCCAGTC TGAAATTAAC
CCTCAACTTG CTAGCCATGG TGGAAATATC ATGTTGCTTG AAGTCACTGA GGATGGTGTT
GCTATTCTAC AGTTCGGTGG TGGTTGTAAC GGCTGCTCTA TGGTAGATGT GACACTGAAA
GATGGTATCG AAAAGCAGCT GCTTGAGATG TTCCCTGGTG AACTAACAGG TGTTAAAGAT
GCGACAGAGC ATCAAGCTGG CGATCACTCG TACCAGTAA
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| Protein sequence | MITISDAAQA HFVNLLADQP EGTHIRVFVI SPGTATAECG VSYCPPDAVE ADDMELEYNG
FNAMVDEKSA PFLEDATIDF VTDQLGSQLT LKAPNAKMRK VASDASLNER IEYVIQSEIN
PQLASHGGNI MLLEVTEDGV AILQFGGGCN GCSMVDVTLK DGIEKQLLEM FPGELTGVKD
ATEHQAGDHS YQ
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