Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0156 |
Symbol | |
ID | 6114379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 191059 |
End bp | 191829 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641631637 |
Product | bioH protein |
Protein accession | YP_001758552 |
Protein GI | 170724526 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCGA GCTTACACAT AGAATCGATT GGCCAAGGTC AAGAGCTGGT CATCCTCCAT GGTTGGGGAG TCAATAGTTC GGTCTTCACT CCGCTTCATG CGTCCCTATC TGAGTATAGA GTCCACTATG TCGATCTGCC CGGTTTCGGG CACAGTGACC CAATTGATGG CGATCTAGAT GATTGGGTTG ATGCCATTAT TAATCAACTT CCTAACACAG CTATCTGGAT AGGCTGGTCT TTGGGTGGTT TAGTCGCAAC TAAGGCGGCC TTAAGATATC CCGAGCAGGT CAGAGGATTA GTCACCATCG CCTCCTCACC CTGTTTTATG GCACGTGAGG ATGAGTCTTG GCCAGGGATC CCTCCTCAAG TACTATCGCA GTTCTCAACT CAACTGCAGC AAAATATCGG TAAAACAATC GAGCGCTTTC TCGCGATCCA AGTCATGGGA AGCGCAACAG CAAAAGAGGA CATAAAGCAG CTAAAGGAGC TGGTTCTTTC TCGACCTTTA CCCAAGAATT CAGCCCTAGC TCAGGGGTTG AAGATGTTGG AAAACATAGA CCTTAGAGCT CAACTCCCTC AAATAGAGCA GCCTTGGTTA AGGGTCTGGG GCCGATTAGA TGGACTAGTG CCTAGACGCG TCCCACCATT GATGCCTAAC CATCAGGCGC ATTTTACCGA TCTCTTACTC CCAAAAGCTT CACACGCCCC TTTCCTCTCC CACAGGGATG AGTTCCTTAC GGGTTTAACA GATTGGTTAA ATAAATTTTA A
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Protein sequence | MSSSLHIESI GQGQELVILH GWGVNSSVFT PLHASLSEYR VHYVDLPGFG HSDPIDGDLD DWVDAIINQL PNTAIWIGWS LGGLVATKAA LRYPEQVRGL VTIASSPCFM AREDESWPGI PPQVLSQFST QLQQNIGKTI ERFLAIQVMG SATAKEDIKQ LKELVLSRPL PKNSALAQGL KMLENIDLRA QLPQIEQPWL RVWGRLDGLV PRRVPPLMPN HQAHFTDLLL PKASHAPFLS HRDEFLTGLT DWLNKF
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