Gene Swoo_0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0156 
Symbol 
ID6114379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp191059 
End bp191829 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content48% 
IMG OID641631637 
ProductbioH protein 
Protein accessionYP_001758552 
Protein GI170724526 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01738] putative pimeloyl-BioC--CoA transferase BioH 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGA GCTTACACAT AGAATCGATT GGCCAAGGTC AAGAGCTGGT CATCCTCCAT 
GGTTGGGGAG TCAATAGTTC GGTCTTCACT CCGCTTCATG CGTCCCTATC TGAGTATAGA
GTCCACTATG TCGATCTGCC CGGTTTCGGG CACAGTGACC CAATTGATGG CGATCTAGAT
GATTGGGTTG ATGCCATTAT TAATCAACTT CCTAACACAG CTATCTGGAT AGGCTGGTCT
TTGGGTGGTT TAGTCGCAAC TAAGGCGGCC TTAAGATATC CCGAGCAGGT CAGAGGATTA
GTCACCATCG CCTCCTCACC CTGTTTTATG GCACGTGAGG ATGAGTCTTG GCCAGGGATC
CCTCCTCAAG TACTATCGCA GTTCTCAACT CAACTGCAGC AAAATATCGG TAAAACAATC
GAGCGCTTTC TCGCGATCCA AGTCATGGGA AGCGCAACAG CAAAAGAGGA CATAAAGCAG
CTAAAGGAGC TGGTTCTTTC TCGACCTTTA CCCAAGAATT CAGCCCTAGC TCAGGGGTTG
AAGATGTTGG AAAACATAGA CCTTAGAGCT CAACTCCCTC AAATAGAGCA GCCTTGGTTA
AGGGTCTGGG GCCGATTAGA TGGACTAGTG CCTAGACGCG TCCCACCATT GATGCCTAAC
CATCAGGCGC ATTTTACCGA TCTCTTACTC CCAAAAGCTT CACACGCCCC TTTCCTCTCC
CACAGGGATG AGTTCCTTAC GGGTTTAACA GATTGGTTAA ATAAATTTTA A
 
Protein sequence
MSSSLHIESI GQGQELVILH GWGVNSSVFT PLHASLSEYR VHYVDLPGFG HSDPIDGDLD 
DWVDAIINQL PNTAIWIGWS LGGLVATKAA LRYPEQVRGL VTIASSPCFM AREDESWPGI
PPQVLSQFST QLQQNIGKTI ERFLAIQVMG SATAKEDIKQ LKELVLSRPL PKNSALAQGL
KMLENIDLRA QLPQIEQPWL RVWGRLDGLV PRRVPPLMPN HQAHFTDLLL PKASHAPFLS
HRDEFLTGLT DWLNKF