| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0151 |
|---|
| Symbol | |
|---|
| ID | 6114374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 184505 |
|---|
| End bp | 184990 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641631632 |
|---|
| Product | transcription elongation factor GreB |
|---|
| Protein accession | YP_001758547 |
|---|
| Protein GI | 170724521 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0782] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGA TGTTAATCAC CAGGAAGGGC TGGCAGGCCT TAGATAAAGA GCTGAAATAC
TTATGGAAAG AGTATCGCCC AGAGATCACT AAGAAGGTGC AGGAAGCTGC AGCCCAAGGG
GATCGAAGTG AGAATGCTGA TTATACCTAT AACAAGCGCC TGCTAAGACA GATAGATAGT
CGAGTTCGCT ATCTGGTGAA ACGGGTGGAA GATCTCACCA TTGTCGATTA TTCACCGCAG
CAGGAGGGCA AGGTCTTCTT TGGTGCCTGG GTAGAGCTCG AAAATGAGTC GGGCGATGTG
GTTCAATATC GTATTGTCGG GAAAGATGAG CTGGATACTA AGTTAGGTTA TATTACTATC
GACTCGCCAA TGGCAAGGGC CTTAATCGGC AAGCAGGTGG ATGATGAAGT GGTCGTAAAA
ACCCCATCAG GTGCTAAAGA GTGGTATGTA AATAAGATTC AATATAAGGC GTTTAAGGAT
GAGTGA
|
|---|
| Protein sequence | MTAMLITRKG WQALDKELKY LWKEYRPEIT KKVQEAAAQG DRSENADYTY NKRLLRQIDS
RVRYLVKRVE DLTIVDYSPQ QEGKVFFGAW VELENESGDV VQYRIVGKDE LDTKLGYITI
DSPMARALIG KQVDDEVVVK TPSGAKEWYV NKIQYKAFKD E
|
|---|
| |