Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0146 |
Symbol | |
ID | 6114369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 178001 |
End bp | 179176 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641631627 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_001758542 |
Protein GI | 170724516 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTCG AACAAGATAT CTCTTCAGTT CAAGTTGGCA TGTACGTATT AGATATCACT AGGCCTAAAA ACAGATTTCA CCTGACAAAA GCAAGCTGGT TAATAAGTGA GAGTATGATT GATGAGTTAA GAAGAAAGGG CGTTGAACGT CTACTCATTG ATACAAGTAA GACCAGGAAA CAGTCTCAAA TTAGATCAGT TTCTAAAGAA AGGGCTAGCC TTATCCCTGG CTTTAACCAA GATATATATG AAGCCAGCAA AGTGTTTAAC GAATCCAAGA ACATTCAAAA AAATCTATTT CACGATGCCA AAAATGGCTG CCCTCTGGAC TTAGCCCCAG TAAAAGCAAT CACACAAAAA TCACTCTACC TCATTTTTGA TAATCCAGAT GCATTAGCCT GCGTAATTAA TATACGCCAC AAAGATGAGT ACTTACTTGA ACACTCGGTT GCCGTATCTA TTCTGCTCAC CATTTTTGCT TTCTATTTAA AGATAGATGT AGAGATAGCC CATGAAATAG CCATTGGCGC TTTTCTCCAT GATGTCGGCA AGATCATGGT GCCCGATTAC ATTTTAAATA AACCCGACAA ATTGACTGAT GATGAGTTTG AGATAATGAA AACTCATGCA TCACACTCAA TCAGTATCAT AGAAAAAACA CCAGGAATAA GCGCATTAAG CTTAGAGGTC GCTAAATTAC ACCACGAGAA ATTAAACGGT GAAGGTTACC CTAATCAAAT ATCTGCCGAG CAGATCACTC AATATGGGCG AATGATATCC ATCTGCGACA TTTACGATGC GTTAACCTCG AGCCGATGCT ATAAAGAGGG CTACCCTCAA GTCAAAGCTT TTACAATTTT ACGCGCATTA GCAAAAGACA ATCAACTTGA TGACTTTCTA GTCGATTCAT TTATTCAGTG TATGGGAGTA TACCCAGTCG GTGCACTCGT ACAACTTAGT TCAAATCGAC TCGCAATTGT AGAAAGCCAT AACCATAAAG ATCCTATAAG GCCGATAGTA AAACCTTTCT ATAGCCTTAA ACCAAAACAT TTTGAAGCTG CACAAGATAT AGATTTAGCA GTATTTGAGA GCGAAGAGAT AGTTAAATGT GTCAGAGCGG ATGACTTTGA CTTGAATATG GAACAAATTA TTGAGTTCTT AGCACATGAA GGATAA
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Protein sequence | MIVEQDISSV QVGMYVLDIT RPKNRFHLTK ASWLISESMI DELRRKGVER LLIDTSKTRK QSQIRSVSKE RASLIPGFNQ DIYEASKVFN ESKNIQKNLF HDAKNGCPLD LAPVKAITQK SLYLIFDNPD ALACVINIRH KDEYLLEHSV AVSILLTIFA FYLKIDVEIA HEIAIGAFLH DVGKIMVPDY ILNKPDKLTD DEFEIMKTHA SHSISIIEKT PGISALSLEV AKLHHEKLNG EGYPNQISAE QITQYGRMIS ICDIYDALTS SRCYKEGYPQ VKAFTILRAL AKDNQLDDFL VDSFIQCMGV YPVGALVQLS SNRLAIVESH NHKDPIRPIV KPFYSLKPKH FEAAQDIDLA VFESEEIVKC VRADDFDLNM EQIIEFLAHE G
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