Gene Swoo_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0146 
Symbol 
ID6114369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp178001 
End bp179176 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content38% 
IMG OID641631627 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001758542 
Protein GI170724516 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTCG AACAAGATAT CTCTTCAGTT CAAGTTGGCA TGTACGTATT AGATATCACT 
AGGCCTAAAA ACAGATTTCA CCTGACAAAA GCAAGCTGGT TAATAAGTGA GAGTATGATT
GATGAGTTAA GAAGAAAGGG CGTTGAACGT CTACTCATTG ATACAAGTAA GACCAGGAAA
CAGTCTCAAA TTAGATCAGT TTCTAAAGAA AGGGCTAGCC TTATCCCTGG CTTTAACCAA
GATATATATG AAGCCAGCAA AGTGTTTAAC GAATCCAAGA ACATTCAAAA AAATCTATTT
CACGATGCCA AAAATGGCTG CCCTCTGGAC TTAGCCCCAG TAAAAGCAAT CACACAAAAA
TCACTCTACC TCATTTTTGA TAATCCAGAT GCATTAGCCT GCGTAATTAA TATACGCCAC
AAAGATGAGT ACTTACTTGA ACACTCGGTT GCCGTATCTA TTCTGCTCAC CATTTTTGCT
TTCTATTTAA AGATAGATGT AGAGATAGCC CATGAAATAG CCATTGGCGC TTTTCTCCAT
GATGTCGGCA AGATCATGGT GCCCGATTAC ATTTTAAATA AACCCGACAA ATTGACTGAT
GATGAGTTTG AGATAATGAA AACTCATGCA TCACACTCAA TCAGTATCAT AGAAAAAACA
CCAGGAATAA GCGCATTAAG CTTAGAGGTC GCTAAATTAC ACCACGAGAA ATTAAACGGT
GAAGGTTACC CTAATCAAAT ATCTGCCGAG CAGATCACTC AATATGGGCG AATGATATCC
ATCTGCGACA TTTACGATGC GTTAACCTCG AGCCGATGCT ATAAAGAGGG CTACCCTCAA
GTCAAAGCTT TTACAATTTT ACGCGCATTA GCAAAAGACA ATCAACTTGA TGACTTTCTA
GTCGATTCAT TTATTCAGTG TATGGGAGTA TACCCAGTCG GTGCACTCGT ACAACTTAGT
TCAAATCGAC TCGCAATTGT AGAAAGCCAT AACCATAAAG ATCCTATAAG GCCGATAGTA
AAACCTTTCT ATAGCCTTAA ACCAAAACAT TTTGAAGCTG CACAAGATAT AGATTTAGCA
GTATTTGAGA GCGAAGAGAT AGTTAAATGT GTCAGAGCGG ATGACTTTGA CTTGAATATG
GAACAAATTA TTGAGTTCTT AGCACATGAA GGATAA
 
Protein sequence
MIVEQDISSV QVGMYVLDIT RPKNRFHLTK ASWLISESMI DELRRKGVER LLIDTSKTRK 
QSQIRSVSKE RASLIPGFNQ DIYEASKVFN ESKNIQKNLF HDAKNGCPLD LAPVKAITQK
SLYLIFDNPD ALACVINIRH KDEYLLEHSV AVSILLTIFA FYLKIDVEIA HEIAIGAFLH
DVGKIMVPDY ILNKPDKLTD DEFEIMKTHA SHSISIIEKT PGISALSLEV AKLHHEKLNG
EGYPNQISAE QITQYGRMIS ICDIYDALTS SRCYKEGYPQ VKAFTILRAL AKDNQLDDFL
VDSFIQCMGV YPVGALVQLS SNRLAIVESH NHKDPIRPIV KPFYSLKPKH FEAAQDIDLA
VFESEEIVKC VRADDFDLNM EQIIEFLAHE G