Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0134 |
Symbol | |
ID | 6114357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 163636 |
End bp | 165252 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641631615 |
Product | AbgT putative transporter |
Protein accession | YP_001758530 |
Protein GI | 170724504 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.722786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATTGA ATAAAGATGA GAGCTTGCCG CAAGATCTCA ACTCTTCAGG GTCTCCTGAG AAACAAAGTG GCGCATTTGT CCGCTTTTTG AATATTGTCG AACGTCTAGG TAATTTACTT CCCCACCCCA TTACACTCTT TGCCATCTTC TGTATGGCCG TAATCGTGAT CAGCGGTATT GCTGGTTATT TTGAGCTTAC CGTGACAGAT CCAAGACCTG TTGGCGCCTC TGGCCGCAGC GAAGATGGTC TTATCCACGT CGTCAGCTTA ATGAACGCCG AAGGCTTGAG AATGATAGTC TCAAACCTTG TCACCAACTT CACCGGATTT ACTCCACTTG GTACCGTACT AGTAGCACTC TTAGGTGTCG GCATTGCTGA GCGCTCTGGC ATGCTCTCGG CTGCCATGCG TTTACTCGTG ATGGGCGCAT CTAAACGCCT TGTTACCTTA ACCTTAGTTT TCGCAGGTAT CGTATCGAAC ACCGCCTCAG AGCTTGGCTA TGTGGTGCTT ATCCCAATGG CAGCCTTGAT ATTTCACTCC CTTGGTCGTC ATCCCTTGGC AGGTCTAGCG GCCGCCTTCG CCGGTGTCTC CGGTGGCTAC AGCGCAAATT TACTGCTAGG TACTGTCGAT CCTCTACTCT CGGGGATCAC TGAAGCAGCA GCCCAGATGA TTGACCCTGA CTATATCGTT GGTCCAGAGG TGAACTGGTA CTTTATGTTT GTTTCGACCT TCCTTATCAC AGGTTTGGGC GCCTTAGTCA CAGAGAAGAT TGTCGAGCCT AAACTTGGAA AGTACGATCC AAGTGAGGCC AATATTGATC TGTCTAATCA ATCGATGGAC AGCGTCACCA CGCTAGAGAA AAAGGGACTA AAAGCAGCAG GTATCGCCAC TTTGATCCTC TCAGTATTAG TTGCACTCAC CGTAGTACCT GAGAGTGGCC CGCTTAGAGA CCCAGAAACA GGACTCGTTG CAGGCTCACC TTTCCTTAAA GGGATCGTCG CCTTTATCTT TATCTGTTTT GCGATCCCAG GCCTTGTTTA CGGTAAAGTC GTCGGCACCA TGAAACGTGA TAAAGATGTA ATTGATGCCA TGTCTAACAG CATGAGCTCA ATGGGCATGT ATATTGTCCT GGTCTTTTTT GCCTCTCAGT TCGTTGCCTT CTTTAAATGG ACCAACTTAG GTGCAGTGCT TGCGGTATCT GGCGCCGATG CCCTAAACGC TATCGGCCTA ACAGGCCCGC TAGTATTTGT ACTGTTTATT ATGATGTGTG GGTTTATCAA CCTTATGCTC GGCAGTGCAT CGGCTCAGTG GGCTGTAACG GCACCGATTT TCGTCCCCAT GTTGATGCTG GTTGGTTACG CACCTGAAAC CATTCAGGCG GCTTATCGTA TTGGAGATTC AGTGACTAAC CTTATCACCC CCATGATGAG TTATTTTGGA CTGATCTTAG CGGTTGCTTC GCAGTATAAG AAGAACTTAG GAATAGGTAC GCTAATCGCA ACCATGCTGC CCTACTCAAT CGTCTTCTTT ATCGGTTGGA CCTGCTTCTT CTTCCTGTGG GTATTCGTAC TTGGTTTCCC TGTAGGCCCA GGTGCTGCCA CCTACTACAC GCCATAG
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Protein sequence | MGLNKDESLP QDLNSSGSPE KQSGAFVRFL NIVERLGNLL PHPITLFAIF CMAVIVISGI AGYFELTVTD PRPVGASGRS EDGLIHVVSL MNAEGLRMIV SNLVTNFTGF TPLGTVLVAL LGVGIAERSG MLSAAMRLLV MGASKRLVTL TLVFAGIVSN TASELGYVVL IPMAALIFHS LGRHPLAGLA AAFAGVSGGY SANLLLGTVD PLLSGITEAA AQMIDPDYIV GPEVNWYFMF VSTFLITGLG ALVTEKIVEP KLGKYDPSEA NIDLSNQSMD SVTTLEKKGL KAAGIATLIL SVLVALTVVP ESGPLRDPET GLVAGSPFLK GIVAFIFICF AIPGLVYGKV VGTMKRDKDV IDAMSNSMSS MGMYIVLVFF ASQFVAFFKW TNLGAVLAVS GADALNAIGL TGPLVFVLFI MMCGFINLML GSASAQWAVT APIFVPMLML VGYAPETIQA AYRIGDSVTN LITPMMSYFG LILAVASQYK KNLGIGTLIA TMLPYSIVFF IGWTCFFFLW VFVLGFPVGP GAATYYTP
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