Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0130 |
Symbol | |
ID | 6114353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 157157 |
End bp | 157912 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641631611 |
Product | hypothetical protein |
Protein accession | YP_001758526 |
Protein GI | 170724500 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0341016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATCA AGATGACACT TCAACACAAG TTACTACTAA GTGGATTACT ACTATCAGCA GCCTCTGTGA CTCAGGTTCA GGCTGAAGAG AATAATCAAG TGCTAGGCGG TACCATCAAT GGCAACCTAA CTTTTGCATC TGACTATGTT TTCCGTGGTG AATCTGAAAC CTTAGACGGT GATGTCCCTG TAGTACAAGG TACATTAGGT TGGGGTAACG ATGATGGTTG GTATGGTGGT GTTTTCGCTT CTAACATCAA GTTCGCCGAT CCAAATCTTG AGATCGTTAC CGCGCCATTT ATCGGTAAAG CAGGTGAATT TGGTGACAGC GGTATCACCT ATGACGTGAT GGTCTTCTCA TACCTTTACC CAGGTGCTTC ATACTCAAAC TACACTGAGC TTTGGCTTAA AGTGGGTAAG CAGTTTGGTC AAGCCAACAT ACAGTTGGAA GTAACACCAA CGATAGATGA TTGGTTTGGT GTCGATGGCT GGCAAGGTGT TAACTACGCA ATTCACCCAA GCTATGAGTT CAGCAATGGC GTTAACCTTT CAGGCTCAGT TGGTTACCAA GACCTTGATG GCGAAGGCGC CGAAGGTTGG GGTCACTGGA ATTTAGGTAT CAGCAAAACT TATGCAGGCC TAAAGTTTGA CCTTAGATAC CACGGCAGCA CCGTCGATGA GACACATAAG GTTTATGGTA CACAAACAGA AATTTTTGAT GACCGATTTG TAATCGGTGT CAGTAAAAGC TTTTAA
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Protein sequence | MTIKMTLQHK LLLSGLLLSA ASVTQVQAEE NNQVLGGTIN GNLTFASDYV FRGESETLDG DVPVVQGTLG WGNDDGWYGG VFASNIKFAD PNLEIVTAPF IGKAGEFGDS GITYDVMVFS YLYPGASYSN YTELWLKVGK QFGQANIQLE VTPTIDDWFG VDGWQGVNYA IHPSYEFSNG VNLSGSVGYQ DLDGEGAEGW GHWNLGISKT YAGLKFDLRY HGSTVDETHK VYGTQTEIFD DRFVIGVSKS F
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