Gene Swoo_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0118 
Symbol 
ID6114341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp143764 
End bp144570 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content41% 
IMG OID641631599 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001758514 
Protein GI170724488 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TTATTCTTAT TACTGGCTCT ACAGATGGCA TAGGGCTGGA GACTGCTAAA 
GCTCTTGTTT CAAACGGGCA CCATGTACTA ATCCATGGCC GTAATCCAAC TAAGCTAGCA
GACGTTAGTG AAATATTATC AGGGTTAGCA GGAGCAGGAG TGGTTGAAAG TTACTGCTCT
GATCTATCTA ACCTTTCCGA TGTTGAAGCA CTCGCTGATA CAATTATGGA TAAACATCAA
AAAATTGATG TGCTAATCAA TAACGCTGGT GTATATAAAA CTGTCAAAAT AGATACGGAA
GATGGCCTAG ATGTTCGCTT TGTTGTAAAT ACCATAGCGC CATTTTTACT TACGCAGCGG
CTAGTAGACC TATTTGATAC CTCAGGTCGA ATCATCAATC TTTCATCGGC AGCCCAATCT
CATGTCGATT TAGACAGTTT AACCAGACCC AATAATGATA TTGAAGACAG TAACATTTAC
GCACAAAGTA AGCTGGGTCT AATCATGTGG TCAATCTATA TGGCAGAGCA ATACAAAGAG
AAGGGGCCAG CAATTATCTC GCTCAATCCA GCCTCGTTAT TAGGAAGTAA AATGGTAAAA
GAGGCCTATG GTATTAAAGG GGGAGACTTA AACATCGGTG TCGATATACT TTGCCGTGCC
GCACTTTCAG ATGAGTTTGC CAACGCTTCG GGTAGATACT TTGACAATGA TGTAGGCCGA
TTTACATCAC CTCATCCAGA TGCGCTAAAC ACCTCGAAAA ATAAAGCGTT AGTCGCAAAA
ATAAAGTCAG TTTTAGCAAA TAAATGA
 
Protein sequence
MKKVILITGS TDGIGLETAK ALVSNGHHVL IHGRNPTKLA DVSEILSGLA GAGVVESYCS 
DLSNLSDVEA LADTIMDKHQ KIDVLINNAG VYKTVKIDTE DGLDVRFVVN TIAPFLLTQR
LVDLFDTSGR IINLSSAAQS HVDLDSLTRP NNDIEDSNIY AQSKLGLIMW SIYMAEQYKE
KGPAIISLNP ASLLGSKMVK EAYGIKGGDL NIGVDILCRA ALSDEFANAS GRYFDNDVGR
FTSPHPDALN TSKNKALVAK IKSVLANK