Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0118 |
Symbol | |
ID | 6114341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 143764 |
End bp | 144570 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641631599 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001758514 |
Protein GI | 170724488 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG TTATTCTTAT TACTGGCTCT ACAGATGGCA TAGGGCTGGA GACTGCTAAA GCTCTTGTTT CAAACGGGCA CCATGTACTA ATCCATGGCC GTAATCCAAC TAAGCTAGCA GACGTTAGTG AAATATTATC AGGGTTAGCA GGAGCAGGAG TGGTTGAAAG TTACTGCTCT GATCTATCTA ACCTTTCCGA TGTTGAAGCA CTCGCTGATA CAATTATGGA TAAACATCAA AAAATTGATG TGCTAATCAA TAACGCTGGT GTATATAAAA CTGTCAAAAT AGATACGGAA GATGGCCTAG ATGTTCGCTT TGTTGTAAAT ACCATAGCGC CATTTTTACT TACGCAGCGG CTAGTAGACC TATTTGATAC CTCAGGTCGA ATCATCAATC TTTCATCGGC AGCCCAATCT CATGTCGATT TAGACAGTTT AACCAGACCC AATAATGATA TTGAAGACAG TAACATTTAC GCACAAAGTA AGCTGGGTCT AATCATGTGG TCAATCTATA TGGCAGAGCA ATACAAAGAG AAGGGGCCAG CAATTATCTC GCTCAATCCA GCCTCGTTAT TAGGAAGTAA AATGGTAAAA GAGGCCTATG GTATTAAAGG GGGAGACTTA AACATCGGTG TCGATATACT TTGCCGTGCC GCACTTTCAG ATGAGTTTGC CAACGCTTCG GGTAGATACT TTGACAATGA TGTAGGCCGA TTTACATCAC CTCATCCAGA TGCGCTAAAC ACCTCGAAAA ATAAAGCGTT AGTCGCAAAA ATAAAGTCAG TTTTAGCAAA TAAATGA
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Protein sequence | MKKVILITGS TDGIGLETAK ALVSNGHHVL IHGRNPTKLA DVSEILSGLA GAGVVESYCS DLSNLSDVEA LADTIMDKHQ KIDVLINNAG VYKTVKIDTE DGLDVRFVVN TIAPFLLTQR LVDLFDTSGR IINLSSAAQS HVDLDSLTRP NNDIEDSNIY AQSKLGLIMW SIYMAEQYKE KGPAIISLNP ASLLGSKMVK EAYGIKGGDL NIGVDILCRA ALSDEFANAS GRYFDNDVGR FTSPHPDALN TSKNKALVAK IKSVLANK
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