Gene Swoo_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0113 
Symbol 
ID6114336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp134614 
End bp135708 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content46% 
IMG OID641631594 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001758509 
Protein GI170724483 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCACTT TGTTTTCACC GGGCCGCATT GGCAACATGA CACTGAAAAA TCGCTTTGTA 
CGAAGCGCGA CGTGGGAAAA TATGGCGACT GAAACAGGCC ATATGACCGA CAAGCTGTAC
TCTGTGTATG AGGAGCTGGC TCAAGGTGAG GTGGGGCTGA TAGTGACTGG CTATGCAAAC
ATTGTTGCCG AGGAAAAGCC TAACGCAGGC ATGATGGGTA TGTACGATGA CTCGTTTATT
GTTGAGTACC AAAAGCTAAC CGAACTTGTA CATGGCTATG ATTCTAAAAT CGTCATGCAG
CTGGCCTATG GTGGCACTAA GACTACATTC AATGTCGGTG AGCGAGTGAT CTTTGCACCG
AGCGCCATTG CTGAACGTGG TACTCAAACC TTAGGTAAGG CGATGACGAA GGAGGAGATT
GATTACATCG TTAAAGCATT TGCACAGGCG AGCCTTCGCG CGCAAAAGTC TGGTTTCGAT
GGGGTTGAGA TCCATGCAGC GCATACCTAT CTTATCAACC AGTTCTTAAG CCCTTACTAT
AACCAACGTC AAGATGAGTA TGGTGGCAGT TTAGAGAACC GTATGCGTTT CTTACTGGAG
ATCTACGCTG AGATCCGCAA GCTGGTGGGT GAGGATTATC CCGTTTTAGT GAAGCTTACT
GCCTCTGAGT TTTTTGAAGG CGGATTAACC TTTGATGAAA CGCGTACCAT CTGTAAAAAG
TTAGAATCGA TTGGTGTTGA TGCCATTATT ATCTCAGGCA ATATCCATGG CAATGCTAAT
ACGGTGGTGG GTGAGTCATT TGATGGCTAT ACCATTCAAA ATGAAGGCTA CTTTCGTGAA
TTTGGTGCTG TTGTAAGTGA AGAGGTGAAC TTGCCAATTA TCACGGTTGG AGGGCTTGCT
GATATCTGTG CCATCGAAGA GCTAGCTGAA ACTACAAATA TTCAATTTTT TGCGCTATCG
CGACCTTTAC TTGCAGAGCC ACAGTTAATC AAACGTTGGT TAGCGGGAAG TAAGGTGGAG
GTGGATTGTG AGCGCTGCTC AAAGTGCCGC ACCAAACGAG GTAACTTTTG TGTCGTGTAT
AGAAAGCGCA GATAA
 
Protein sequence
MSTLFSPGRI GNMTLKNRFV RSATWENMAT ETGHMTDKLY SVYEELAQGE VGLIVTGYAN 
IVAEEKPNAG MMGMYDDSFI VEYQKLTELV HGYDSKIVMQ LAYGGTKTTF NVGERVIFAP
SAIAERGTQT LGKAMTKEEI DYIVKAFAQA SLRAQKSGFD GVEIHAAHTY LINQFLSPYY
NQRQDEYGGS LENRMRFLLE IYAEIRKLVG EDYPVLVKLT ASEFFEGGLT FDETRTICKK
LESIGVDAII ISGNIHGNAN TVVGESFDGY TIQNEGYFRE FGAVVSEEVN LPIITVGGLA
DICAIEELAE TTNIQFFALS RPLLAEPQLI KRWLAGSKVE VDCERCSKCR TKRGNFCVVY
RKRR