| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0105 |
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| Symbol | |
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| ID | 6114328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 126298 |
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| End bp | 127479 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631586 |
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| Product | diaminopropionate ammonia-lyase |
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| Protein accession | YP_001758501 |
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| Protein GI | 170724475 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family
[TIGR03528] diaminopropionate ammonia-lyase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTAA AGCTGACTCA AAATGATTTC TTTAACGGCG AGACCTCTGA GCTTTTCACA
GCCCAGGTTG CAGAACAAAC TCGTCAATTC CACCAGCAGA TCGAAGCTTA TCAACCGACT
CCGCTTATCT CGCTAGAGCA GCTAGCCGCA CGTTTAGGTG TTAAAGCGAT TCTGGTAAAA
GATGAGTCTT ACCGCTTCGG TTTAAATGCT TTTAAAGTGT TAGGCGGTTC TTACGCATTA
GGTAAACAAT TAGCTGAGCA CTTAAATGTA GATATCAGTG AAATTGATAT GAAAACCGTT
GCAGCTAAGC TAAGCGAGCC ATTGGTGTTT GCCACAGCAA CAGCGGGTAA CCACGGAACA
GGTGTGGCTT GGGCTGCACG TGAAATGGGC CAAAAGGCTG TTGTTTACAT GCCAAAAGGT
TCATCTCAAG CAAGCGTAAC TCGTATTCAG AATCTAGGTG CTGAGTGTAT CGTTACTGAC
TGTAACTACG ATGACACAGT ACGTATCGCT AACCAAACCG CCACAGAAAA TGGTTGGATG
CTAGTACAAG ATACTGCATG GGAAGGTTAC GACAAGATCC CAACTTGGAT CTCGCAAGGT
TATATGACCA TGGCAGTTGA AGCCCAAGAG CAAGTTGACG CCATGGGTCT TAAGCCAACT
CACCTAATGC TACAAGCGGG TGTTGGCGCA ATGGCTGGCG GCATTTTAGG GTATTTTGCT
GACAAAGTTG GCGCGACTAA CTTCAAGACC ATTATTGCAG AGCCTGCAAA AGCAGATTGC
ATCTACAACT CTGGTATTAA AGGTGAGATG GTTGCCGTAA CTGGCGAGTT AAACTCTATC
ATGGCAGGTC TTGCATGTGG CGAGCCTAAC CCAGTGACTT GGCCTATCCT AAAGCAGTGC
AGCAGCTTCT TCGCATCAGT TGAAGATGAA GTGACAGCTA CAGGTATGCG TATTCTTGGT
AACCCGCTAG CAGGCGATAC CAAAATTGTT AGCGGTGAGT CAGGAGCACT AAATCTTGGC
CTACTGTACA TGCTAGCTAG CCGTGAAGAG TACACTGAGT ACCGCACTCA ACTTGGTCTA
GACCAAGATG CGATTATCAT GCTGTTCAGC ACTGAAGGCG ACACTAACCC AGACCGTTAC
CGTCAAATCG TTTGGGAAGG TGCACTAAGC ACAGCGAAAT AA
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| Protein sequence | MMLKLTQNDF FNGETSELFT AQVAEQTRQF HQQIEAYQPT PLISLEQLAA RLGVKAILVK
DESYRFGLNA FKVLGGSYAL GKQLAEHLNV DISEIDMKTV AAKLSEPLVF ATATAGNHGT
GVAWAAREMG QKAVVYMPKG SSQASVTRIQ NLGAECIVTD CNYDDTVRIA NQTATENGWM
LVQDTAWEGY DKIPTWISQG YMTMAVEAQE QVDAMGLKPT HLMLQAGVGA MAGGILGYFA
DKVGATNFKT IIAEPAKADC IYNSGIKGEM VAVTGELNSI MAGLACGEPN PVTWPILKQC
SSFFASVEDE VTATGMRILG NPLAGDTKIV SGESGALNLG LLYMLASREE YTEYRTQLGL
DQDAIIMLFS TEGDTNPDRY RQIVWEGALS TAK
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