| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0102 |
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| Symbol | |
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| ID | 6114325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 123798 |
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| End bp | 124481 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641631583 |
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| Product | ThiJ/PfpI domain-containing protein |
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| Protein accession | YP_001758498 |
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| Protein GI | 170724472 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGTC GAGATTTTAT CACTGCTGGC GGCATTGCTG TTGCGAGCGC CCTATTTGCA
CCACACTTGT TTGCTACACC AAAGGGGAAG CCCTTGAAGA TTCTCGCTTT AGTGTTTGAT
GATTATGAAA CACTAGACTT ACACGGTCCT GTTGAGATGC TGGGACATAT GAGTCATGTG
CAGATTCTGT TGGTGGGGGC CAAATCTATC ATTAGAAGCT ATCAGGGCCC TAAAGTGGTG
ACCGATATCT CGATGGAGCA GGTGACGCCC TGTGATCTTT TGATTGTCCC CGGTGGGATC
GGCACCCGAA CACTCGTTGA GGACAGTGAG TTGTTGAGTT GGCTACAAGC TCAGGAAAAG
GTCTCTAAGA AGGTGTTTTC TATCTGTACG GGCTCCGCTC TATTAGCTAA AGCTGGCATT
TTAGACGGTG TTAATGCCAC GACCAATAAG ATGGCTTATC AATGGGTAAC AAGCTTATCT
CAGAGAGTCC ACTGGCAACC AAGTGCACGT TGGGTTGATG AGGGGAAGTT TCTGACCTCA
TCTGGCGTCT CCGCTGGAAC AGATGCAGCC CTGTTTTATG TCCGCCAACT ACGTGGTGAA
GAGGAAGCAA GACGTATTGA ACGGTTAACT GAGTATCACT GGAATGATGA CTCGACTAAT
GATCCTTATG CCGTTGAGGT GTAA
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| Protein sequence | MKRRDFITAG GIAVASALFA PHLFATPKGK PLKILALVFD DYETLDLHGP VEMLGHMSHV
QILLVGAKSI IRSYQGPKVV TDISMEQVTP CDLLIVPGGI GTRTLVEDSE LLSWLQAQEK
VSKKVFSICT GSALLAKAGI LDGVNATTNK MAYQWVTSLS QRVHWQPSAR WVDEGKFLTS
SGVSAGTDAA LFYVRQLRGE EEARRIERLT EYHWNDDSTN DPYAVEV
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