Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0100 |
Symbol | |
ID | 6114323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 121694 |
End bp | 122872 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641631581 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_001758496 |
Protein GI | 170724470 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTGAAT CGGTAGAATC TAAGGCTCAT GTTAAGTTTC CTGTCTCAAA ATTGAGCGTA GGTATGTTTG TTACATCGAT TGATAATGAT GGGCAAGTGG CCATAACCAA TGCTGGTCAG ATTAAAGACA GAGAAGCGAT TAACAAGCTC ATCAAAAATG GTATTAAATA TGTTTGGGTC GATAAGGAGA GATCTGCCGA CTCCTGTGGT TTTAAAAATA CGGTCCAACC TCCTCCAACA GTAAAGAAGA AAGCCCCATC TAGAGAAGCA TCACAACAAA AAGCCAAAAA GTTAGTGACC GAAGCGAAAG ATCTATTAGC TAAAGTCTTG TCTGAAACCT TCGAGGGAAA GGCGATAGAG GTCGCACCTT TTGAGGAGTT TGCTGATAAC CTTATTGATT CTGCTCTGCT TGATTCCGAT GCACTCAAAT GTGTGTCAGC ATTAAGAACA AAAGATGCCT ATCTGCTTGA ACACTCCGTC AATGTCGCCT TTTTATTGAT CACCTTTGGT CAGCACCTTA ACCTTGATAA GCAAAAGCTT AAGGAGATGG CTGTCGGTGG CATATTGCAT GATGTGGGTA AGATTCAAGT CGATGATAAA GTACTCCACA AACCGGGCAA GTTGAGCCAG GAGGAGTTTG AGCACATGAA GAAGCATCAG AACTTCGCCA TGAATATTAT GTCAAAAACC GATGGCATAT CGCAGATAAG CAAAGATGTT TGTTTGATGC ATCATGAGAA GCTTGATGGT AACGGTTACC CCAATGGATT AAAGGGAGAG GAGCTGCCAC TTCATGGGCG TATGAGCTGT ATTGTGGATA TTTATGACGC CTTAACTGCT AAGCGTTGTT ACAAAGATGC CATGAGTCCA GCAGCGGCAT TTAAAGTGTT ACTTAGCTTA ACCCCTTTTC ACTTAGATGA AGCATTGGTT TATCAGTTTA TTCGCTCTGT TGGCGTCTAT CCCGTAGGCT CTCTTGTTGA GCTCTCTGAT GGTCGAATAG GGATTGTATG GCATGCAAAA GGTAGAGATG CACTACACCC GATACTGAAA TGCTTCTATT CTATTAAACA TAAACGCTAT CTCGATGTGA CGTTCGTTGA TCTGCTTAAG AGTGATGCCA ATATTGAACG CGGTATTTCC CCCTGTAGCC TCGATGTCGA TCCAGCTCCA TTTTATTGA
|
Protein sequence | MVESVESKAH VKFPVSKLSV GMFVTSIDND GQVAITNAGQ IKDREAINKL IKNGIKYVWV DKERSADSCG FKNTVQPPPT VKKKAPSREA SQQKAKKLVT EAKDLLAKVL SETFEGKAIE VAPFEEFADN LIDSALLDSD ALKCVSALRT KDAYLLEHSV NVAFLLITFG QHLNLDKQKL KEMAVGGILH DVGKIQVDDK VLHKPGKLSQ EEFEHMKKHQ NFAMNIMSKT DGISQISKDV CLMHHEKLDG NGYPNGLKGE ELPLHGRMSC IVDIYDALTA KRCYKDAMSP AAAFKVLLSL TPFHLDEALV YQFIRSVGVY PVGSLVELSD GRIGIVWHAK GRDALHPILK CFYSIKHKRY LDVTFVDLLK SDANIERGIS PCSLDVDPAP FY
|
| |