| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0094 |
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| Symbol | |
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| ID | 6114317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 115863 |
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| End bp | 117812 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641631575 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001758490 |
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| Protein GI | 170724464 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC AACAAAAAGT GCTGAGAGTA TCTAGCTTGG CGCTAGCCAT GAGCTTGGCT
TATCAGGTTC AGGCTGATGA AATCGAAAGA GATCCAATTC TTGATGTGAC AGACGTTATT
GTGGTGCACG GTGAGCGCGC TTCAGTAACC GAGGCCGCTA CGACTCATTG GAGCGTAGAT
GCGGAAGAAA TTAAGGCGTC AGGCGCACAG AGTTTAGATC AAGTTCTTGA AAACGTTCCA
GGGGTTTATG TGCGCGTGGG TGGTGATTCA ACTCCACGAG TTGATATTCG AGGTTTAAAA
ACGCGCCACA TTACTTTCTT AATTAACGGT GTACCAGCAA GTAGCACCGA AGATGGTCAG
TTTGATCCAA GTGTTATCCC AACGAATCTA ATTGCTCGAG TTGATGTTTC TGTTGGTCCT
ACATCTGTGC TGTATGGCCC GGGTGGAAGT GCGGGTGTGA TTAACATTAT CACTAAGCAA
GGTGATGAAT CATCTTCGCT GTCAGGTAAA GTAGAATCCG CTGCTGACAA TACGCTCAAT
GCTGATATCA GTGCAGCAGG TTCAGGTGAT AACTGGCAAG GTATTATGAG CGTGACTCAT
CAAGAAACTG ATGGCACTCC AATGCCTGAT GATTTTGAAG ATACGCGCAA TCAGATCGGT
GATCTGCGCT TTAATTCAGA CAGAAAGTTA ACTAACTACT ACGCCCAAGG TAGTTACTTC
ATCAACGATT CAACTAAGTT AATGGCTAAT TACACTCAGC GTGATGGTGA GTGGGGGAAA
GCACCTACCG TTGACCGCAA GAAAGCTCCC TCAAGGATTG AAGATTTCAA TGAGCAAAGC
ATGCAACTTG GTGCAGCCCA TGAAATAAAC GAGAAGTATG TTGTTCGTGG TTTTGTCTAC
TATAACCAAA CAGATATGGT TGAAAACTTC TATAACCATA GAATGAACAA CCTAAATAGT
ATTGTTGAAA GTACCTCTAA AGTCAGCGGT ACTAACCTTC AATTTATTAG CGAATTTGAT
TATGGCGCAG TGTTAACCAC CTCTGTCATT GTTGAAAAGC AAGATTGGTT CTCTCATACA
GATAAAATTC GTAGTGAAAA AGGCACGGGC AGTGGTGGCG GCTCTGGCGG CGGTCAAGGC
AGTTCTGGTG ATATCGATGA AAGCTTGATG GTTTATACCG GTGCTGCAGA GTACCAATAT
CAAGATGACG GTATATATGG CTACAGCTTA GGTGTTGCGG TTCACAATTA CGATCTTGAT
GTGAACAGTG AGACAGACTT TTCAGCGCAA GCGTCTGCAT TTTACCAAGT CACAGACTCA
AGCCGTATCC ATACAGGTCT TGCTCGAAAA GTTCGTTATC CATCGATCAG CGATCTTTAC
GCGCCTAACA GCGGTAACGT GAACCTAAAA GCCGAAGTTG CTAACCAGTT TGAACTGGGT
CTACAGCAAT CTCTACCTTT CGATACTCAG TTAGATATCA GTAGCTACAT AACTGATGCC
AATGATTACA TTGCTAAAGA TGATAACAAC CACGAGCAAA ACATTGGTGA TTATCGCTTT
ATGGGGGTTG ATTTGCAGAT GACGAATCAA TATTTCGATA GCCTAGGTTT AACGTTTGCC
TATAGCTACA TCGATACCGA GGACCGTGCT ACTAATGAGC GTTTGCAATA CCGTCCGACC
CATAACTTGC GCCTGCAAGC GAGCTATGAC TTCTCCTTTG GTTTAACGAC ACGTTTAAAT
GCTGAGCGCG TTATTGATCA AGTGAATGGC AAAGGTGTTC AGCTAGATAA TTACACCTTA
GTTGACCTAA GTTTGAGCCA GAATATCTGG CATGACAATT TAGAGTTATA TGTCCGAGCT
ACAAACCTAT TTGATGAACT TTATTATCAA AGCGACTTTA TGCCACAGGC GGGTCGTCAG
GTGTTTGTCG GTATTAACTG GCAGCTTTAG
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| Protein sequence | MKKQQKVLRV SSLALAMSLA YQVQADEIER DPILDVTDVI VVHGERASVT EAATTHWSVD
AEEIKASGAQ SLDQVLENVP GVYVRVGGDS TPRVDIRGLK TRHITFLING VPASSTEDGQ
FDPSVIPTNL IARVDVSVGP TSVLYGPGGS AGVINIITKQ GDESSSLSGK VESAADNTLN
ADISAAGSGD NWQGIMSVTH QETDGTPMPD DFEDTRNQIG DLRFNSDRKL TNYYAQGSYF
INDSTKLMAN YTQRDGEWGK APTVDRKKAP SRIEDFNEQS MQLGAAHEIN EKYVVRGFVY
YNQTDMVENF YNHRMNNLNS IVESTSKVSG TNLQFISEFD YGAVLTTSVI VEKQDWFSHT
DKIRSEKGTG SGGGSGGGQG SSGDIDESLM VYTGAAEYQY QDDGIYGYSL GVAVHNYDLD
VNSETDFSAQ ASAFYQVTDS SRIHTGLARK VRYPSISDLY APNSGNVNLK AEVANQFELG
LQQSLPFDTQ LDISSYITDA NDYIAKDDNN HEQNIGDYRF MGVDLQMTNQ YFDSLGLTFA
YSYIDTEDRA TNERLQYRPT HNLRLQASYD FSFGLTTRLN AERVIDQVNG KGVQLDNYTL
VDLSLSQNIW HDNLELYVRA TNLFDELYYQ SDFMPQAGRQ VFVGINWQL
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