| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0089 |
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| Symbol | |
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| ID | 6114311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 108979 |
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| End bp | 111096 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631569 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001758485 |
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| Protein GI | 170724459 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0206322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCT TCCCACGAAT TTTTGGCATT AACTGGCAGC AGATGCAGGC AAAGGTGCGT
TATCGCATCT TGATTTTAAC CTTGCTCCCG ATATTGTTAA CCTTGGTAAG CTTAGTGTTT
ATCACCATCT ACTGGAACAT TAGCTACACG GGCAAGCAGC TGTTTATGAA GGTGAAAGCT
GATCTTACTG TTGCCAATAA CACCTTAATT TCAGTGCAGC GCAGTCAAGA GAAGCAGCTT
GAGATGGTGA TGGAATCTTG GCCATTTCAA AATGACTTTA GATTGTTTTC CGGCACTAAA
CAAAAATATA GAGATGAGAT AGATAGTTTA CTCGAAGAGC GAAAAGAGCA GCTTAATTTA
GACTTTTTAC GGTTAGTGAG TGTCTCTGAA GCGGCAGCCG ATCCCGATCT TCGTCAGATG
TTGCAGCGAG TGAATGGGGT CACTCCCTTT TCTGGGTTGA TGGTGTTATC ACCGGAGCGT
CTAGCCAGAA TTGATCCTGA GTTGGTTAAG CTTGCCAGTA TCCCCCTTGT TGAAACGCCT
AGATCTCAAA AGCCAAGTAA GAGTGTGGAG GAGCGGGGGA TGTTGAGCCG TAGCCTGCTC
CCTGTGCCCG ATGCACATGG TAATGTCTCC TGGTATCTCG ATGGCGGTAT TTTATTTAAT
CGCGATATCC GTATTGTCGA TCATATTCGC GATCTGGTTT ATGACAAGGG CACACTTCCT
GAACGCTCTA TAGGTACTGT CACTATCTTC CTCGACAATA CCCGCATTAG CACCAATGTA
CCGCTGCACT TTTTCCCCCA AGGCGATCAA TCCGTTGGTC GAGCCTTAGG TAGCTTGGTC
TCTGAGGAGG TGAAGTCAAA AGTGTTAACT CAGGGGATGC TTTGGGTCGA TCGCGCTTTT
GTATTTAATG ATTGGTTTAT CTCGGCTTAT GCGCCCCTTG AAGATGTGCA GGGCAAGCGA
GTTGGCATGA TCTACACAGG ATTTTCAGAA TCGCCTTTTA TCCATAATTA TCTACTGAAT
ATTATCGAAT TAGGTACCAT CTTGATGTTG GTACTGCTGG TATCGGGACT GTTGGTTTAT
CGAGGGGCGT ACAGTTTACT TCAGCCTATT GAGCGTATTC ACCATGTTGT TAAGGCGGTG
CAGTCGGGAC GTAACTTACG TATTGGCTCA CTAGGGCTAG AGCGTGACAA TGAGCTATCC
AATTTGGCGG AGCAGTTTGA TCGCATGTTG GATCTGCTGC AGAAGCGTAA TACTCAGATC
CAAGCGGCAG CAGAGCAGCT TGAGGTGAAG GTGGAGGAGC GCACGCGCAG TCTTCAGGAG
AAGACGGTTG AGCTACAAAA TAACGTCGAG CTGTTAAATG AAACCAGACA GCAGTTGGTG
ACCAATGAAA AGCTTACCGC TTTGGGTGAG TTAACGGCGG GTATCGCCCA TGAGATCAAT
AACCCAACAG CGGTTATCTT GGGAAATATG GAGCTGCTTA AGTTTGAATT GGGACAGAAC
GCCGATTGTG TTGAGGAGGA GATCGAGCTG GTTATCCAGC AGGTGGGACG AATTAGCACT
ATTATTCGTA GTCTTCTGCA GTACAGCCGA CCAGGAGAGT TCAATGCGCC TTTAGAGATG
CATCAACTCA CCCCTATTAT CGAAGAGATG TTGGTGTTGG TTAGGCACTC GATTAAGGAG
CAGAAGGTGG TGCTGACTCA GGAGCTCAAT GCCAGTTACC CCATTGAGGT TAATCGTCCT
CAGCTGCTTC AAGTATTGAT TAATTTAGTG GTCAATGCTG CCCATGCGAT GAATGAAGAT
GGACGCATCT GGATACGCAC CTATGACTGG GTTGTGAAGG ATGAGCCTAT TGGTGTGAAG
ATAGAGGTGG AAGATGAAGG TAAGGGGATC CCTAAGGAGC AACTTAATCG TATCTTCGAT
CCTTTTTATA CCACCAGAGC CGATGGGACA GGATTAGGCT TGTCTCTGAG TTACGGGATC
ATCAAGCGTA TTGGTGGCAC CATAGAAGTG AGCTCCACCG TGGGCAAGGG GACGCTATTT
ACCATAGGTC TCTACCATAA AGCTAAAGAA GATCAGAATG ACACCCCCTA CAAAGGGCTG
CATTTTAACG AGAGTTGA
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| Protein sequence | MSFFPRIFGI NWQQMQAKVR YRILILTLLP ILLTLVSLVF ITIYWNISYT GKQLFMKVKA
DLTVANNTLI SVQRSQEKQL EMVMESWPFQ NDFRLFSGTK QKYRDEIDSL LEERKEQLNL
DFLRLVSVSE AAADPDLRQM LQRVNGVTPF SGLMVLSPER LARIDPELVK LASIPLVETP
RSQKPSKSVE ERGMLSRSLL PVPDAHGNVS WYLDGGILFN RDIRIVDHIR DLVYDKGTLP
ERSIGTVTIF LDNTRISTNV PLHFFPQGDQ SVGRALGSLV SEEVKSKVLT QGMLWVDRAF
VFNDWFISAY APLEDVQGKR VGMIYTGFSE SPFIHNYLLN IIELGTILML VLLVSGLLVY
RGAYSLLQPI ERIHHVVKAV QSGRNLRIGS LGLERDNELS NLAEQFDRML DLLQKRNTQI
QAAAEQLEVK VEERTRSLQE KTVELQNNVE LLNETRQQLV TNEKLTALGE LTAGIAHEIN
NPTAVILGNM ELLKFELGQN ADCVEEEIEL VIQQVGRIST IIRSLLQYSR PGEFNAPLEM
HQLTPIIEEM LVLVRHSIKE QKVVLTQELN ASYPIEVNRP QLLQVLINLV VNAAHAMNED
GRIWIRTYDW VVKDEPIGVK IEVEDEGKGI PKEQLNRIFD PFYTTRADGT GLGLSLSYGI
IKRIGGTIEV SSTVGKGTLF TIGLYHKAKE DQNDTPYKGL HFNES
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