| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0088 |
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| Symbol | |
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| ID | 6114310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 107595 |
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| End bp | 108974 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641631568 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001758484 |
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| Protein GI | 170724458 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.711445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA GTAATAAAGA GCTAAAACCC CTTCCATCAG CCGTTTCTGT GCTTATTGTT
GACGATGAGC CCGGAATGCG CAGCTTTTTG AAAAAAGCCC TCTCGAAAAA GTTTGCCTTA
GTCGAGACCG CTTCCAGCGT TGAAGATGCT GAGCAGCTAC GAAGTCGCTG CCATTTTGAT
CTACTTATTG TTGATATTCG CCTGCCTGGA CGTTCAGGAA TTGAGTGGCA TGAAGCCTTA
AATGATCAGG AGCGCCGCTC AGATATCATC TTTATGACGG GTTACGCCGA TATGGATGTT
GCCATTAAAG CGCTGCGAGC AGGTGCTTCA GACTTTATTA TGAAGCCATT TCATTTAGAG
CAGATGATGA AGGCGGTTGA TCGCTGCATC GAACGGCGTC TACTTAAGCG TGAAAACCTG
ATGCTTAGGC GCGAGGTCTC TATAGGTCAA TCCTCTACCA TCATAGGCAG CAGTGATGCT
ATGCAGGAGG TGAAACACAT TATTGAGCGT GTGGCGCCAA CCAATGCGGT TATTTTGATT
GAAGGTGAAT CAGGCACAGG TAAAGAGCTG GTTGCCAGAC AGCTGCATCT GCTTAGTGGA
AGGCAGGGCC CCTTTGTTCC CGTTAACTGT GGTGCTATCG CGCCTGAGCT ACTTGAAAGT
GAGTTGTTCG GCCATTGTGC TGGGGCATTT ACTGGTGCTA AAGGCAATCG TGAAGGTCTA
TTTAGTTTTG CCTCTGGCGG CACTATTTTT CTTGACGAGA TTGGCGAGAT GCCACTTAAG
ATGCAAACCG CACTGTTGCG CGTACTTGAG CAGAGAACCA TCCGGCCTGT AGGCAGTGAA
AAAGAGACCA ATATTGATGT CCGGGTATTG GCTGCCACAA ATAGAAAATT GGCTGAAGAG
GTTGAGGCTG GCCATTTCAG ACGCGATCTC TACTATCGAC TCAATGTGCT CGATATCTTA
ATTCCTCCTT TGCGAGAGAG ACCCGAAGAT GTGGTGGAGT TGACGCATCA CTTCACCCGC
CAACTTGCGT CTGAGCTTGG GGTGAAGGAG GTGGTCTGGA GCCATGAAGA TATGCTAAAG
CTACAGCAGC ATGAGTGGCC GGGTAATATC CGTGAGTTAA GGAATATGAT TGAACGCTGT
ATTTTACTTG GCAAACCCCC GGCTGAGTAT TGGAAGCAGC AGCCAAAAGC CGAAGTGGTA
GGTGAGTCGG GTTATCCGCT CAATTGGTGC CTTAAAGAGG TCGAAAAGCA CCATGTGACT
CAGGTTGTCG ATGCTCATAA TGGTAATAAA TCTGCGGCAG CAAGGGATCT TGGTGTTTCT
AGAAAGACCC TAGATAGAAA GTATAAAGAG TGGTTTGACA GTGAAAGTGC CGGAGAATAA
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| Protein sequence | MSQSNKELKP LPSAVSVLIV DDEPGMRSFL KKALSKKFAL VETASSVEDA EQLRSRCHFD
LLIVDIRLPG RSGIEWHEAL NDQERRSDII FMTGYADMDV AIKALRAGAS DFIMKPFHLE
QMMKAVDRCI ERRLLKRENL MLRREVSIGQ SSTIIGSSDA MQEVKHIIER VAPTNAVILI
EGESGTGKEL VARQLHLLSG RQGPFVPVNC GAIAPELLES ELFGHCAGAF TGAKGNREGL
FSFASGGTIF LDEIGEMPLK MQTALLRVLE QRTIRPVGSE KETNIDVRVL AATNRKLAEE
VEAGHFRRDL YYRLNVLDIL IPPLRERPED VVELTHHFTR QLASELGVKE VVWSHEDMLK
LQQHEWPGNI RELRNMIERC ILLGKPPAEY WKQQPKAEVV GESGYPLNWC LKEVEKHHVT
QVVDAHNGNK SAAARDLGVS RKTLDRKYKE WFDSESAGE
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