Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0087 |
Symbol | |
ID | 6114309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 106500 |
End bp | 107312 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641631567 |
Product | extracellular solute-binding protein |
Protein accession | YP_001758483 |
Protein GI | 170724457 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2998] ABC-type tungstate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAACC TTAAATCTAT CTTCAGCTTA GCTTTAGCTG CAACTCTAGT CACAGCTATG CCTGCAACAG CAGAAGAGAT TATCAAGTTA GCGACAACAA CCAGTACAGA GAACTCAGGT TTATTGAAAA ACCTACTGCC TAAATTTGAA GCAGAAACTG GTTATAAAGT ACAAGTGATA GCAACAGGCA CAGGCAAAGC ATTAAAACTT GCTCGCCAAG GCGATGTGGA TCTAGTGATG ACTCACGCGC CAGCGGCTGA AGCAAAATTC GTTAACGAAG GCTTCGGAAT TTTGCCTCGT GGCATTATGG AAAACGATTT TGTGATCTTA GGCCCTAAAA ATGACCCAGC TAAGATCCGT GGCAGTAAGA CAGCAGAGGA AGCATTTGCT AAAATAGCCA AGTCTGGCGC CACCTTTATC TCTCGTGGCG ATAACTCTGG CACTAACATG AAAGAGTTAA TTATCTGGAA AAATGCCGAT ATCGCGCTGA CTTTTAATGG CTACAAAGCC GTAGGCCAAG GCATGGGTAA GACACTATTA ATGGCTAGCG AGCTTCAGGG TTACACCCTG TCAGATCGTG GTACATTTGT AGCGTATAAA GCAAAATTAG ATCTTGCGAT TGATTATGAT GGCGGTAAAG CACTAGCAAA CCCTTATCAG ATCGTATTAA TTAACCCAGA AAAATACCCT GAACTGAATC ATAAAGGCGC ACGTGCCTTT AGTGACTGGT TAATCGGTGC TGAAGCTCAA GGCATGATTA ATAGCTATAA GGTTCAAGGT GAGCAACTAT TTAAGGCAAC ATATAGCGAA TGA
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Protein sequence | MLNLKSIFSL ALAATLVTAM PATAEEIIKL ATTTSTENSG LLKNLLPKFE AETGYKVQVI ATGTGKALKL ARQGDVDLVM THAPAAEAKF VNEGFGILPR GIMENDFVIL GPKNDPAKIR GSKTAEEAFA KIAKSGATFI SRGDNSGTNM KELIIWKNAD IALTFNGYKA VGQGMGKTLL MASELQGYTL SDRGTFVAYK AKLDLAIDYD GGKALANPYQ IVLINPEKYP ELNHKGARAF SDWLIGAEAQ GMINSYKVQG EQLFKATYSE
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