Gene Swoo_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0080 
Symbol 
ID6114302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp96780 
End bp98267 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content38% 
IMG OID641631560 
Producthypothetical protein 
Protein accessionYP_001758476 
Protein GI170724450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTATG AAGCAAGTGA GTTGGAGTTA GCTTTTGTTA GCTTAAATAA AAACGAAAGG 
CCACTTTGGG CATTGGCTGC GGTGTTTATT AGTTATGTCT GTATGCTATT TCTGATGTTT
TTTGCAGAAA AATATGTAGG CGGTACAATT CTGCATTTTA TTGTTCAGCC ATTCGTTGTT
GGGTTTTGTA CGCGTTATGT TGGGCGATTG TACTCTATTA AAGCACGTGC TCCTTCTGTG
ATTTTGTTCG CATTTTTATA CATCTGCATA GGGGTACTCG CCAGTCTGCA GGCCTTATAT
TTTATTGCCT TACCTATTCC TATGTTAATC GTTTTCTTCA CAAGTAGAAT AAAGCTTACA
AGAGTTCAAG AGTTTGCTTT ACTTGAGTAT CAAACAACTT CATTAGATAT AGATCTTCAT
CCAAGAAGTA GAAAAACCTT GTATGCATTT TTAGGAGTAC TTTTTATTAC TGCTTTAACC
GTATATTGGT GGACAAGTAA TGCAAATAGC TGCATGAATG CTCTTGAAGG TAGTAATAAT
TCTTTTGTGG TAGAAAGTTG CTCGTATAAC CAATTCTCTT CATTGGAGGA GATGGCAACT
ATTGAGGATG AGCTATCCAT TGACTTATTT GGTACATTTT CATTGCCTAG CCCTGAAGCA
TTATTGATAA AAGAAAAGGC TGAGTCTGGT GATGTATTTT ATCAACGCTT CTATTTCGTA
ATCTTAGCTA TCTTTTATCA GAAAAGTGTT TTGTGGGAGG GGAATTTTAT TGTCGAGCGA
CACCGTGAAG AGGTGGCTTA TTGGTCAGCG ATTACGGCAG CTGATGGCTT CACTCCTGCA
ATGATAAAAA TACTCAATGG CTTACTTGAC TTACCTTTAG TCTCTGAGGA GCAGAAACTT
GAAGCAATGG ATTTGGCTGA GGAGCTAGTT ATTAATGGTT CTGAAGAAGC ATATTTATTA
ACTCTGGTTG GTAAATTGGT AACGATTGAG GATGTAAGGC AATTGTTTCA TCAGCAATCT
AACACGCTTG ACTTGCTAAC AGAGGAGCAG TTGGAAAATT TGATGTATGC ATATAAACAA
GGTGATTATT TTTACAATTT GTCAGATTTT GATCCATCTA TAGAAGTTGA GGAGCCTTAT
ACTAAAAGTA TAAGAGTTCC TCGGCAAAAG GATAAAGTTA TAGACGTGTT GAAAGTGATG
TCTAAAAAGT TTAATGACAC AGATGCCTCA TACCAAGTTG CTCAAATGTT GTTAAGAGAA
AGTAGCCTCG AGTCGATAGA TTTTTTTACC TTAGCTGCTG AACAAGGTCA TGCTTACGCA
GCAACAAAGT TAGGTTCTTT ATATTTTTGT TCTGGCAGAA AAGTTGAGAG TTTGTCTTGG
TTGAAGAGGG CTATTAAGCT GGGGAGCAAG GAGGCTGTTG CAATTCAGAG GAAGATTATA
AAAGGCGAGT CTTTATCTGT TTGTCAGAGG GGGGATCGGA AGCTGTAA
 
Protein sequence
MRYEASELEL AFVSLNKNER PLWALAAVFI SYVCMLFLMF FAEKYVGGTI LHFIVQPFVV 
GFCTRYVGRL YSIKARAPSV ILFAFLYICI GVLASLQALY FIALPIPMLI VFFTSRIKLT
RVQEFALLEY QTTSLDIDLH PRSRKTLYAF LGVLFITALT VYWWTSNANS CMNALEGSNN
SFVVESCSYN QFSSLEEMAT IEDELSIDLF GTFSLPSPEA LLIKEKAESG DVFYQRFYFV
ILAIFYQKSV LWEGNFIVER HREEVAYWSA ITAADGFTPA MIKILNGLLD LPLVSEEQKL
EAMDLAEELV INGSEEAYLL TLVGKLVTIE DVRQLFHQQS NTLDLLTEEQ LENLMYAYKQ
GDYFYNLSDF DPSIEVEEPY TKSIRVPRQK DKVIDVLKVM SKKFNDTDAS YQVAQMLLRE
SSLESIDFFT LAAEQGHAYA ATKLGSLYFC SGRKVESLSW LKRAIKLGSK EAVAIQRKII
KGESLSVCQR GDRKL