| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0078 |
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| Symbol | |
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| ID | 6114300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 94604 |
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| End bp | 95419 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641631558 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001758474 |
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| Protein GI | 170724448 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAAC TTCCGGAAGT TGAGGTCACC CGTCAAGGGG TCTCACCCTA TCTGATTGAC
CAAGAGGTCA CAGGCCTTAC CGTACGTAAC GCCAGCTTGC GTTGGCCCGT CCCTGATTTG
GCGCAGCAGA TTGTCGGTCA AACCATACGT AGTGTGCATC GCCGCGCTAA ATATCTGCTT
ATTGATACCG ATGCAGGTAC GACAATTGTG CATCTAGGTA TGTCTGGCAG CTTAAGGGTG
GTGACAGAGC TCACTCCGGT TGAGAAGCAT GACCATATCG ATTTAAGCTT GGCCAGTGGC
AAGATACTGC GCTTTAACGA CCCGAGGCGC TTTGGTGCTT GGTTATGGTA TGAGCTGCCC
ATTGATGCAC ACCCCCTACT GTCTAAACTT GGGCCCGAAC CTTTAACTGA TGCATTCAAT
CCAAGCTATC TGTTTGAATC GTTAAAAGGG AAGAAAAAAG CGATAAAGCT CTGTCTGATG
GATAACCATA TCGTGGTTGG TGTAGGCAAT ATCTACGCTA ACGAGGCTCT CTTTGCAGCG
GGAATACATC CACAAATGGA AGCGGGTAAG GTAGATCAAG AGCGCTTGAT TATCTTAGTT
TCAGAGGTGA AACAGATCTT AGCCAATGCG ATAAAACAGG GGGGAACCAC CCTAAAAGAC
TTTACCAACG CCGAAGGCAA GCCTGGCTAC TTTGCCCAGA AGCTTCACGT TTATGGCCGC
GGAGGAGAGA GCTGTACTCA GTGTGGTAAC CTGCTCAGTG AGATTAAGTT AGGCCAGAGA
GCCACTGTAT TCTGTGGCTT GTGCCAAACG AGATAA
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| Protein sequence | MPELPEVEVT RQGVSPYLID QEVTGLTVRN ASLRWPVPDL AQQIVGQTIR SVHRRAKYLL
IDTDAGTTIV HLGMSGSLRV VTELTPVEKH DHIDLSLASG KILRFNDPRR FGAWLWYELP
IDAHPLLSKL GPEPLTDAFN PSYLFESLKG KKKAIKLCLM DNHIVVGVGN IYANEALFAA
GIHPQMEAGK VDQERLIILV SEVKQILANA IKQGGTTLKD FTNAEGKPGY FAQKLHVYGR
GGESCTQCGN LLSEIKLGQR ATVFCGLCQT R
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